ggKbase home page

SCNpilot_cont_300_bf_scaffold_937_curated_8

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(8131..8361)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000366190B similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 63.0
  • Bit_score: 92
  • Evalue 2.50e-16
Variovorax paradoxus strain MEDvA23 contig_70, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25197.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 64.0
  • Bit_score: 86
  • Evalue 1.50e-14
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 66.0
  • Bit_score: 75
  • Evalue 9.80e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 231
ATGAAAGCACCAGCCCACATTCTCGACCTCCCCGACGGTTGGACTGCGGATTTCGAGATCGTCCGCACCCTTCATGGCTCCTATGCCGGCATTGCCAGGCTGAGCCTCAGTGGCGTACAGAAGTGCGCGCTGGTCATCACGCAGCAACTGACCTGGGACGGTGCCTTCGAGCGCGCATGCGTTCGGGCCGCGCACTTCGTGCGGGAGTGGATCTCCAGCGCCAGGGAGTGA
PROTEIN sequence
Length: 77
MKAPAHILDLPDGWTADFEIVRTLHGSYAGIARLSLSGVQKCALVITQQLTWDGAFERACVRAAHFVREWISSARE*