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SCNpilot_cont_300_bf_scaffold_937_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_937_curated_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(57..1835)
DNA (1779bp) protein (593aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003689392
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS22911.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_937_curated_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1941..3350)
DNA (1410bp) protein (470aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1Z0_VARPS
Putative protein involved in formation of curli polymers-like protein
Uncharacterized protein {ECO:0000313|EMBL:ACS22910.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_937_curated_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3367..3963)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1Y9_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS22909.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_937_curated_4
unknown

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comp(4008..4214)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037AAB81
SCNpilot_cont_300_bf_scaffold_937_curated_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4211..5632)
DNA (1422bp) protein (474aa)
EAL domain-containing protein n=1 Tax=Variovorax sp. CF313 RepID=J2KHJ1_9BURK
EAL domain-containing protein {ECO:0000313|EMBL:EJL72558.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_937_curated_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6791..7048)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037D58F8
Uncharacterized protein {ECO:0000313|EMBL:EJL75578.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_937_curated_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7170..7820)
DNA (651bp) protein (217aa)
Crp/Fnr family transcription regulator n=1 Tax=Variovorax paradoxus RepID=UPI000371C654
transcriptional regulator, Crp/Fnr family
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AGU53064.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_937_curated_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8131..8361)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000366190B
Variovorax paradoxus strain MEDvA23 contig_70, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25197.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_937_curated_9
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9146..10345
DNA (1200bp) protein (400aa)
Integrase family protein n=4 Tax=Proteobacteria RepID=B2UA34_RALPJ
integrase family protein
Integrase family protein {ECO:0000313|EMBL:EED68063.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
SCNpilot_cont_300_bf_scaffold_937_curated_10
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10342..11478
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2UA35_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD27729.1}; Flags: Precursor;; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12J).;"
SCNpilot_cont_300_bf_scaffold_937_curated_11
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11524..12312)
DNA (789bp) protein (263aa)
Uncharacterized protein n=6 Tax=Proteobacteria RepID=A9BTW7_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF09915.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
SCNpilot_cont_300_bf_scaffold_937_curated_12
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12319..13221)
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=A9BTW6_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD27731.1}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12J).;"
SCNpilot_cont_300_bf_scaffold_937_curated_13
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13311..14504
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2UA38_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD27732.1}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12J).;"
SCNpilot_cont_300_bf_scaffold_937_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14501..16756
DNA (2256bp) protein (752aa)
UBA/THIF-type NAD/FAD binding protein n=6 Tax=Proteobacteria RepID=A9BTW4_DELAS
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ABX35378.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
UBA/THIF-type NAD/FAD binding protein
SCNpilot_cont_300_bf_scaffold_937_curated_15
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16802..17872
DNA (1071bp) protein (357aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=A9BTW3_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD27734.1}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12J).;"
SCNpilot_cont_300_bf_scaffold_937_curated_16
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18249..18599
DNA (351bp) protein (117aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=B2UA41_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EED68056.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
SCNpilot_cont_300_bf_scaffold_937_curated_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18663..18941
DNA (279bp) protein (93aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=A9BTW1_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX35375.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_300_bf_scaffold_937_curated_18
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19084..19383)
DNA (300bp) protein (100aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=B2UA43_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF09908.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
Displaying 18 items

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