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SCNpilot_cont_300_bf_scaffold_174_curated_2

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 247..1926

Top 3 Functional Annotations

Value Algorithm Source
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 559.0
  • Bit_score: 1058
  • Evalue 0.0
long-chain fatty acid--CoA ligase n=1 Tax=Variovorax paradoxus RepID=UPI00036BC785 similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 559.0
  • Bit_score: 1086
  • Evalue 0.0
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EJL79795.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 559.0
  • Bit_score: 1071
  • Evalue 0.0

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1680
ATGACCGACCGTCCCTGGCTCAGCAGCTACCCGCAGGGTGTGCCCGCAGATATCGATGCATCGCACTACCCCTCGCTGGTCGCGCTCATGGAAGAGAGCTTCTCCAAGTACGCCGACCGCACGGCCTACAGCTTCATGGGCAAGGACATCAGCTACGGCGAGACCGACAAGCAGAGCAAGGCCTTCGCGGCCTACCTGCAGGGCCTGGGCCTGGTGAAGGGCGATCGCGTCGCCGCGATGATGCCCAACTGCCCGCAGTACCCGATCGCGGTCGCGGCCATCCTGCGCGCCGGCCTGATCCTGGTCAACGTGAACCCGCTGTACACGCCGCGCGAACTCGAGCACCAGCTCAAGGACTCGGGCGCCAAGGCCATCATCATCATGGAGAACTTCGGCACCACGCTGCAGCAGTGCATTGCGTCCACGCCGATCAAGCACATCGTGCTGGCCTCCATGGGCGACCGCCTCGGCTTCCTGAAGGGCGCGCTGGTCAACTACGTGGTGCGCAACGTCAAGAAGCTGGTGCCCCACTTCAGCCTGCCCGGCGCGGTGCGCTTCAACGACGCGCTCGACAAGGGCGCGAGCGGCTCGGTCAAGCCCGTGGCCATCGGCCCCGACGACGTGGCCGTGCTGCAGTACACCGGCGGCACCACCGGCGTGTCCAAGGGCGCGGTGCTGCTGCATCGCAACGTGATCGCCAACGTGCTGCAGTCCGAAGCCTGGAACGAGCCGGCCATGGCCAAGGTGCCGGCCAACGAGCAGCCCACCGGGGTGTGCGCGCTGCCGCTCTATCACATCTTCGCGTTCACGGTCGGCATGATGCTGAGCATGCGCACGGGCGGCAAGCTGATCCTGATCCCGAACCCGCGCGACATTCCCGCCGTGCTGAAGGAACTGTCGAAGCACACCATCCACAGCTTCCCGGCCGTCAACACGCTGTTCAACGGGCTGGCGAACCACCCCGACTTCAACACCGTCAACTGGAAGAACCTCAAGATCTCGGTCGGCGGCGGCATGGCCGTGCAGGCCGCGGTCGCCAAGCTCTGGCTCGAGAAGACCGGCTGCCCGATCTGCGAGGGCTACGGCCTGTCGGAGACCTCGCCGTCGACCACCTGCAACCCGACCAACAGCACCGCCTACACCGGCACCATCGGCCTGCCGCTGCCGGGCACCTGGCTCAAGCTGCTCGACGACGAAGGCAATGAAGTGCCGCTGGGCGAGCGCGGCGAAATCGCCATCAAGGGCCCGCAGGTGATGGCCGGCTACTGGCAGCGTCCCGACGAGACCGCCAAGGTCATGACGCCCGACGGCTACTTCAAGAGCGGCGACATCGGCGTGGTCGACGAGCGCGGCTACTTCAAGGTGGTCGACCGCAAGAAGGACATGATCCTGGTGTCGGGCTTCAACGTGTACCCGAACGAGGTGGAAGACGTGGTCGCGCTGATTCCGGGCGTGCTCGAATGCGCGGCGGTCGGCGTGCCCGACGAGAAGACCGGCGAGGCCGTGAAGCTCGTGATCGTGAAGAAAGATCCGTCGCTCACCGAAGCGCAGGTGCGCGAATATTGCCGGGCAAATCTAACGGGTTACAAGCAGCCGCGAATCGTAGAGTTTCGTACCGAGATGCCGAAGACGCCGGTCGGAAAGATTCTTCGCCGCGAGTTGCGAGACTCCAAAAAGTAA
PROTEIN sequence
Length: 560
MTDRPWLSSYPQGVPADIDASHYPSLVALMEESFSKYADRTAYSFMGKDISYGETDKQSKAFAAYLQGLGLVKGDRVAAMMPNCPQYPIAVAAILRAGLILVNVNPLYTPRELEHQLKDSGAKAIIIMENFGTTLQQCIASTPIKHIVLASMGDRLGFLKGALVNYVVRNVKKLVPHFSLPGAVRFNDALDKGASGSVKPVAIGPDDVAVLQYTGGTTGVSKGAVLLHRNVIANVLQSEAWNEPAMAKVPANEQPTGVCALPLYHIFAFTVGMMLSMRTGGKLILIPNPRDIPAVLKELSKHTIHSFPAVNTLFNGLANHPDFNTVNWKNLKISVGGGMAVQAAVAKLWLEKTGCPICEGYGLSETSPSTTCNPTNSTAYTGTIGLPLPGTWLKLLDDEGNEVPLGERGEIAIKGPQVMAGYWQRPDETAKVMTPDGYFKSGDIGVVDERGYFKVVDRKKDMILVSGFNVYPNEVEDVVALIPGVLECAAVGVPDEKTGEAVKLVIVKKDPSLTEAQVREYCRANLTGYKQPRIVEFRTEMPKTPVGKILRRELRDSKK*