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SCNpilot_cont_300_bf_scaffold_174_curated_5

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 4024..5052

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide/dipeptide ABC transporter, ATP-binding protein (Fragment) n=1 Tax=Variovorax sp. CF313 RepID=J2TC74_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 342.0
  • Bit_score: 636
  • Evalue 1.60e-179
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJL75777.1}; Flags: Fragment;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 342.0
  • Bit_score: 636
  • Evalue 2.20e-179
oligopeptide/dipeptide ABC transporter ATPase; K12371 dipeptide transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 341.0
  • Bit_score: 629
  • Evalue 6.00e-178

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGCCTTTGCTTGATATCAAGGACCTGCACGTCGAGTTCCCCACGCAGGGCGGCGTGCTGCACGCAGTCGACGGCGTCAGCCTCACGCTCGAAGAAGGCGAGGTGCTCGGCATCGTCGGCGAATCGGGCTCGGGCAAGAGCGTCACCATGATGGCGCTGATGGGCCTCGTCGGATTTCCCGGCCGGGTGCGCGCGGAGCACATGCGCTTTGCGGGCAAGGAGCTGCTCGGCATCTCCGACAAGGCGCGCCGCTCGCTGGTCGGCAAGGAGGTCGCGATGATCTTCCAGGAGCCGACCACCAGCCTCAACCCCTGCTTCACCATCGGTTTCCAGCTGATGGAAACATTGCGGCTGCACCTGAAGCTCGACAAGCGCGAGGCGAAGCGCCGCGCGACCGAGCTGCTCGAGCAGGTGGGCATTCCCGCCGCGTCCTCGCGCCTGGGCAGCTATCCGCACCAGCTCTCGGGCGGCATGAACCAGCGCGTGATGATCGCGATGGCCATCGCCTGCAACCCGCGCCTGCTGATCGCCGATGAGCCGACCACCGCGCTCGACGTCACCATCCAGGCGCAGATCCTCGACCTGCTGCGCGACCTGCAGAAAGAGCGCGGCATGGCGCTGGTGCTCATCACGCACAACATGGGCGTGGTGAGCGAGATGGCGCAGCGCATCGCCGTGATGTACGCGGGCCAGGTGATGGAGCACCAGCGCGTCGACCACCTCTTCGCATCGCCGCAGCACCCGTACACGGAAGCGTTGCTCGCGGCATTGCCCGAACGCGTCGCGCCCGAGGGTCGGCTCGCCACCATCAGCGGCATGGTGCCCGGCGTGCACGACCGGCCGGCGGGTTGCCTGTTCGCGCCGCGTTGCAGCTACGTGACCGAGCGCGCCTGCCATGTGCGCCCGGCGCTGCGCGAATGGCAGGGCGCGGAGGTGCGATGCCACTTTCCGCTCGGCGAACCGGGGCGCAAGGCGGCCATCGAAAGCGATCCGCCGCGGCGGCGTGCGACCGACAAGGTGCTGCCATGA
PROTEIN sequence
Length: 343
MPLLDIKDLHVEFPTQGGVLHAVDGVSLTLEEGEVLGIVGESGSGKSVTMMALMGLVGFPGRVRAEHMRFAGKELLGISDKARRSLVGKEVAMIFQEPTTSLNPCFTIGFQLMETLRLHLKLDKREAKRRATELLEQVGIPAASSRLGSYPHQLSGGMNQRVMIAMAIACNPRLLIADEPTTALDVTIQAQILDLLRDLQKERGMALVLITHNMGVVSEMAQRIAVMYAGQVMEHQRVDHLFASPQHPYTEALLAALPERVAPEGRLATISGMVPGVHDRPAGCLFAPRCSYVTERACHVRPALREWQGAEVRCHFPLGEPGRKAAIESDPPRRRATDKVLP*