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SCNpilot_cont_300_bf_scaffold_174_curated_4

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 2987..3892

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3F4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 300.0
  • Bit_score: 545
  • Evalue 3.20e-152
binding-protein-dependent transport systems inner membrane component; K12370 dipeptide transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 300.0
  • Bit_score: 545
  • Evalue 1.00e-152
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU34644.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 300.0
  • Bit_score: 545
  • Evalue 4.50e-152

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGGCCTCGACTCAAACAGTTTCCGCCGGTGCAAAAAGCACCGCCCCTCCCGGCCCCTTGCGCGAGTTCTGGGCGGCCTTCTCGGCCAACCGTGGCGCGGTCATCGGGCTCGTCACCATCATCCTGCTGATGCTGGTCGCGATGTTCGCGCCGTGGATCGCGCCGCATGCGCCGAACGAAACCAACAGCGCCGTCTTCCTGCAGCCGCCGGCGTGGCAGCAGGGCGGCTCCACGAGCTACCTGCTGGGCACCGACGCGATCGGGCGCGACATTCTTTCGCGGCTCATGTACGGCGCACGGCTGTCGCTGTCCATCGGCGTGGCGGTGGTGGCGCTGTCGGTGGTGGTGGGCGTGGTGCTCGGGCTGATCGCGGGCTTCTTTCGCGGCGTGCTCGAGATCGCGATCATGCGGCTGATGGACATCGTGCTCACGCTGCCCAGCCTGCTGCTCGCCATCGTGATCGTCGCCATTCTCGGGCCGGGGCTGGTCAATGCAATGCTCGCGGTGGCCATCGTGGTGCTGCCGCACTACGTGCGCATCACGCGCGCCGCCGTCATCGCCGAGGTCTCGCGCGACTACGTGACCGCAGCGCGCGTGAGCGGCGCCGGCACGCTGCGCCTGATGTTCCGCGAGGTGCTGCCCAACTGCGCCGCGCCGCTCATCGTGCAGGCTTCGCTCGGCATCTCCACGGCCATCCTCGACGCGGCGGCGCTCGGCTTCCTCGGCCTCGGCGCGCAACCGCCTTCACCCGAGTGGGGAACCATGCTGGCCGACGCGCGCGAGTTCGTGCTGCGCGCCTGGTGGGTCGTCACCTTCCCAGGGCTGGCGATCCTCATGGCCGTGCTGGCTTTCAATCTTCTGGGTGACGGCCTGCGCGATGCACTCGACCCCAAGCTCAAGCGCTAG
PROTEIN sequence
Length: 302
MASTQTVSAGAKSTAPPGPLREFWAAFSANRGAVIGLVTIILLMLVAMFAPWIAPHAPNETNSAVFLQPPAWQQGGSTSYLLGTDAIGRDILSRLMYGARLSLSIGVAVVALSVVVGVVLGLIAGFFRGVLEIAIMRLMDIVLTLPSLLLAIVIVAILGPGLVNAMLAVAIVVLPHYVRITRAAVIAEVSRDYVTAARVSGAGTLRLMFREVLPNCAAPLIVQASLGISTAILDAAALGFLGLGAQPPSPEWGTMLADAREFVLRAWWVVTFPGLAILMAVLAFNLLGDGLRDALDPKLKR*