ggKbase home page

SCNpilot_cont_300_bf_scaffold_174_curated_14

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 13604..14071

Top 3 Functional Annotations

Value Algorithm Source
pts iia-like nitrogen-regulatory protein ptsn; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 155.0
  • Bit_score: 292
  • Evalue 1.00e-76
Phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) n=1 Tax=Variovorax sp. CF313 RepID=J2K6D8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 155.0
  • Bit_score: 292
  • Evalue 2.50e-76
Variovorax paradoxus strain MEDvA23 contig_67, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25642.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 155.0
  • Bit_score: 293
  • Evalue 1.60e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGAATCGCCTCGCGTCCATCCTGCCGCCCGCTCAAGTGCTCGTGAGCGTTGACGCTACTAGCAAGAAACGTGCTTTCGAAGAAGCAGGTCTGCTGTTCGAAAGCCTTCACGGTCTGGGACGCGCCCTGATCACCGACAGCCTGTTTGCGCGCGAGCGCCTCGGCTCCACCGGTCTGGGCCACGGTGTCGCCATTCCGCATGGCCGCATCAAGGGCCTGAAGGCGCCGATGGCCGCCGTGTTCCAGCTGGCCAACCCGATCGGCTTCGACGCCCCCGACGAACAGCCTGTCGCTTTGCTGATCTTCCTGCTGGTGCCCGAAGCGGCCACGCAGAAGCACCTCGAAATCCTCTCTGAAATCGCCGAGCTGCTGAGCGACTCCAGCCTGCGCGAACAGATCAAGTCCAGCACCGACGCCGCCGCCCTGCACGGCCTCATTGCCGGCTGGCACTCCACCCAGGTCGCCTGA
PROTEIN sequence
Length: 156
MNRLASILPPAQVLVSVDATSKKRAFEEAGLLFESLHGLGRALITDSLFARERLGSTGLGHGVAIPHGRIKGLKAPMAAVFQLANPIGFDAPDEQPVALLIFLLVPEAATQKHLEILSEIAELLSDSSLREQIKSSTDAAALHGLIAGWHSTQVA*