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SCNpilot_cont_300_bf_scaffold_174_curated_40

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(48592..50094)

Top 3 Functional Annotations

Value Algorithm Source
major facilitator transporter n=1 Tax=Variovorax paradoxus RepID=UPI000371AF29 similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 500.0
  • Bit_score: 940
  • Evalue 9.70e-271
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EJL69896.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 494.0
  • Bit_score: 933
  • Evalue 9.70e-269
EmrB/QacA subfamily drug resistance transporter similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 496.0
  • Bit_score: 925
  • Evalue 1.00e-266

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1503
ATGACATCCCCACAGACACCAGAAGCCGCCGTCGCGCCGGCCCCGCCTTCCATCGGCTCGATGCGCCAGCGCTATGGCGAACGCTACCGCTGGTACCTGCTGCTGTCGGTCATGGTGGGGACGATGGCGTCGATCATGTCCTCGACCATCGTCAACGTGGCGATTCCCGGCATGAGCCATCACTTTTCGCTCGGCCAGGAGCGGGCGCAGTGGGTGAGCTCGGGCTTCATGGTGGCGATGACGGTGTCGATGCTCACCACGCCCTGGCTGCTGTCGCGCTACGGCTACCGGCGCACCTACGTGGGCACCATGCTGTTGCTGCTGGTGGGCGGCATCGTGGGCGGGGTGGCCAACGACTTCTCGCTGGTGCTGTTCGCGCGCGTGGCCGAAGGGCTGGCGGCGGGCGTGGTGCAGCCGATTCCGGCCATCATCATCCTGCGCGCCTTCGAGCCGCACGAGCAGGGGCGCGCCAGCGGCATCTTCGGCATGGGCGTGGTGCTGGCGCCGGCCATCGGGCCGAGCATCGGCGGGGTGCTGGTCGACCTGTTCGGCTGGCGCTCGATCTTCTTCATGGTGGTGCCGTTCTGCCTGGCCTCGCTCTGGCTGGCCTACAAGTTCGTGCCGACCACGGCGCCCGGCGGCGTGGCGGCCGTGCGCGGCGGCGGGCTCGACGGACGCGGGCTGGCGCTGGGCACCATCGGCACGCTGTGCCTGCTGAACGGACTGGTGGCGCTGCGCGGCGATTCGCCCCTGCAGGCCGCTTTGCTGCTGGCCGGCGCGCTGGTGGCATTCGGCGCCTTCGTGTGGTGGCAGCGGCGGCTGGCTGCCTCGGGCGGCACGCCGCTGATGAACCTGGCGCTGTTCCAATACCGGCAGTTCGCGATGGGCAGCGTGGTGGCATTCATCTACGGCACGGCGCTGTTCGGCTCGACCTACCTGCTGCCGGTGTACATGCAGGTGGGGCTGCATCTGTCGGCCTCGCACGTGGGCACCATCCTGCTGCCGGCGGGCATCGTGCTGGCAGTGACCATCGCCGGCGTGGGCCGGCTGGCCGACAGGCATCCGACCTGGGTGCTGGTGACCATCGGCCTCGCGCTGCTGGCTTCGTCGTTCGCGCTGATGATGGTGCTGCGGCTGGACAGCGCGCTGTGGCTGCTGGTGGCGTTCGCGATCATCGGGCGCATCGGGCTGGGCTTCATCCTGCCCTCGCTCAACCTGGGCTCGATGCGGCCACTGGCCAAGCCGCTGATTCCGCAAGGCGCAAGCGCCATCAACTTCGTGCGCATGCTGGGCGGCGCGGCCGGCGTGAGCCTGTGCGCCATCGTGCTCGAGTGGCGGCTGGCGGCGCACGGCGATTCGCTGGCCAACCCGATGAGCAGCCCGGCGCGGCTGGCGGCCTTCGACGAGGTGTTCGCGATGCTGGCGGGGCTCTGCGCGCTGGCCATTTGCGCGGCCTGGCAGCTGCGGCAGGGGCCGGCCGAGACGGCGCACAAGACGGGGTAA
PROTEIN sequence
Length: 501
MTSPQTPEAAVAPAPPSIGSMRQRYGERYRWYLLLSVMVGTMASIMSSTIVNVAIPGMSHHFSLGQERAQWVSSGFMVAMTVSMLTTPWLLSRYGYRRTYVGTMLLLLVGGIVGGVANDFSLVLFARVAEGLAAGVVQPIPAIIILRAFEPHEQGRASGIFGMGVVLAPAIGPSIGGVLVDLFGWRSIFFMVVPFCLASLWLAYKFVPTTAPGGVAAVRGGGLDGRGLALGTIGTLCLLNGLVALRGDSPLQAALLLAGALVAFGAFVWWQRRLAASGGTPLMNLALFQYRQFAMGSVVAFIYGTALFGSTYLLPVYMQVGLHLSASHVGTILLPAGIVLAVTIAGVGRLADRHPTWVLVTIGLALLASSFALMMVLRLDSALWLLVAFAIIGRIGLGFILPSLNLGSMRPLAKPLIPQGASAINFVRMLGGAAGVSLCAIVLEWRLAAHGDSLANPMSSPARLAAFDEVFAMLAGLCALAICAAWQLRQGPAETAHKTG*