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SCNpilot_cont_300_bf_scaffold_174_curated

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Displaying items 31-60 of 190 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_174_curated_31
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36035..37108
DNA (1074bp) protein (358aa)
DNA polymerase iii subunit delta (EC:2.7.7.7); K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
DNA polymerase III, delta subunit n=1 Tax=Variovorax sp. CF313 RepID=J2SW95_9BURK
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EJL69887.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_174_curated_32
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37179..38471
DNA (1293bp) protein (431aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;"
gamma-glutamyl phosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
Gamma-glutamyl phosphate reductase n=1 Tax=Variovorax sp. CF313 RepID=J2K9I9_9BURK
SCNpilot_cont_300_bf_scaffold_174_curated_33
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38595..39923
DNA (1329bp) protein (443aa)
glutamate/cysteine ligase; K01919 glutamate--cysteine ligase [EC:6.3.2.2]
glutamate--cysteine ligase n=1 Tax=Variovorax paradoxus RepID=UPI00037C74A7
Glutamate--cysteine ligase, ferrooxidans family {ECO:0000313|EMBL:EJL69889.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_174_curated_34
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40008..41957
DNA (1950bp) protein (650aa)
potassium transporter Kup n=1 Tax=Variovorax paradoxus RepID=UPI00035EC37E
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
potassium transporter; K03549 KUP system potassium uptake protein
SCNpilot_cont_300_bf_scaffold_174_curated_35
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41979..43256
DNA (1278bp) protein (426aa)
Putative benzoate transporter n=1 Tax=Variovorax paradoxus B4 RepID=T1X5D5_VARPD
Variovorax paradoxus strain MEDvA23 contig_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27466.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
putative benzoate transporter
SCNpilot_cont_300_bf_scaffold_174_curated_36
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43256..44215
DNA (960bp) protein (320aa)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00162}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
glutathione synthetase (EC:6.3.2.3); K01920 glutathione synthase [EC:6.3.2.3]
Glutathione synthetase n=1 Tax=Variovorax sp. CF313 RepID=J2K9J5_9BURK
SCNpilot_cont_300_bf_scaffold_174_curated_37
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44229..46445)
DNA (2217bp) protein (739aa)
TonB-denpendent receptor n=1 Tax=Variovorax paradoxus RepID=UPI00037E0C0F
TonB-dependent siderophore receptor {ECO:0000313|EMBL:AGU47644.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
TonB-dependent siderophore receptor
SCNpilot_cont_300_bf_scaffold_174_curated_38
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46562..47311)
DNA (750bp) protein (250aa)
Glutamine amidotransferase class-II n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V4D3_VARPE
glutamine amidotransferase class-ii; K07008 glutamine amidotransferase
Glutamine amidotransferase class-II {ECO:0000313|EMBL:ADU34679.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_174_curated_39
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47369..48514)
DNA (1146bp) protein (382aa)
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00035D46F0
Variovorax paradoxus strain MEDvA23 contig_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27471.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
extracellular ligand-binding receptor
SCNpilot_cont_300_bf_scaffold_174_curated_40
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48592..50094)
DNA (1503bp) protein (501aa)
major facilitator transporter n=1 Tax=Variovorax paradoxus RepID=UPI000371AF29
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EJL69896.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
EmrB/QacA subfamily drug resistance transporter
SCNpilot_cont_300_bf_scaffold_174_curated_41
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50241..51551
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2SWA6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL69897.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_174_curated_42
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51542..51784)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000369D422
Uncharacterized protein {ECO:0000313|EMBL:EJL69898.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_174_curated_43
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51781..53046)
DNA (1266bp) protein (422aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;"
phosphofructokinase; K00850 6-phosphofructokinase [EC:2.7.1.11]
6-phosphofructokinase n=1 Tax=Variovorax paradoxus RepID=UPI00037CAC4A
SCNpilot_cont_300_bf_scaffold_174_curated_44
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54142..54492
DNA (351bp) protein (117aa)
Sel1 domain protein repeat-containing protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CJA5_VARPS
Sel1 domain-containing protein repeat-containing protein
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:ACS17105.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_174_curated_45
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54697..55500)
DNA (804bp) protein (268aa)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Variovorax sp. CF313 RepID=J2JPZ2_9BURK
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:EJL69900.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
enoyl-CoA hydratase/isomerase family protein
SCNpilot_cont_300_bf_scaffold_174_curated_46
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55506..56684)
DNA (1179bp) protein (393aa)
fadA1; 3-ketoacyl-CoA thiolase FadA (EC:2.3.1.16)
3-ketoacyl-CoA thiolase FadA {ECO:0000313|EMBL:AGU47653.1}; EC=2.3.1.16 {ECO:0000313|EMBL:AGU47653.1};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
acetyl-CoA acetyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI0003616606
SCNpilot_cont_300_bf_scaffold_174_curated_47
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56820..57152)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X5Q7_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU47654.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_174_curated_48
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57235..58161
DNA (927bp) protein (309aa)
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus B4 RepID=T1X679_VARPD
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU47655.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_174_curated_49
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58169..58747)
DNA (579bp) protein (193aa)
Secreted/surface protein with fasciclin-like repeats n=1 Tax=Variovorax sp. CF313 RepID=J2K9K5_9BURK
Variovorax paradoxus strain MEDvA23 contig_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27477.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
beta-ig-h3/fasciclin
SCNpilot_cont_300_bf_scaffold_174_curated_50
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59163..59378
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CE97_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL69904.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_174_curated_51
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59357..60676)
DNA (1320bp) protein (440aa)
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036A2704
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACS17113.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_174_curated_52
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60815..62989)
DNA (2175bp) protein (725aa)
Malate synthase G {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572}; EC=2.3.3.9 {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
malate synthase g (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9]
Malate synthase G n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V4E7_VARPE
SCNpilot_cont_300_bf_scaffold_174_curated_53
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63195..64172
DNA (978bp) protein (326aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
histidinoL-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
histidinol-phosphate aminotransferase n=1 Tax=Variovorax paradoxus RepID=UPI0003649EC3
SCNpilot_cont_300_bf_scaffold_174_curated_54
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64229..65200
DNA (972bp) protein (324aa)
Candidate extracytoplasmic binding receptor n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4L9_RAMTT
Variovorax paradoxus strain MEDvA23 contig_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27483.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
tctC; extracytoplasmic binding receptor
SCNpilot_cont_300_bf_scaffold_174_curated_55
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65247..65987)
DNA (741bp) protein (247aa)
Transcriptional regulator, IclR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V4E9_VARPE
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADU34695.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_174_curated_56
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66114..67052
DNA (939bp) protein (313aa)
pyruvate carboxyltransferase; K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
3-hydroxy-3-methylglutaryl-CoA lyase n=1 Tax=Variovorax paradoxus RepID=UPI000363100C
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:EJL69908.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_174_curated_57
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67045..68235
DNA (1191bp) protein (397aa)
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Variovorax sp. CF313 RepID=J3CEA0_9BURK
Putative acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:EJL69909.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative acyl-CoA transferase
SCNpilot_cont_300_bf_scaffold_174_curated_58
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68240..69220
DNA (981bp) protein (327aa)
LacI family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003645193
Uncharacterized protein {ECO:0000313|EMBL:EJL69910.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_174_curated_59
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69272..70198
DNA (927bp) protein (309aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CEL5_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL69911.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_174_curated_60
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70264..70716
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V4F3_VARPE
hypothetical protein; K08983 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ADU34699.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
Displaying items 31-60 of 190 in total

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