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SCNpilot_cont_300_bf_scaffold_174_curated_51

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(59357..60676)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036A2704 similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 431.0
  • Bit_score: 723
  • Evalue 1.20e-205
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 431.0
  • Bit_score: 721
  • Evalue 1.50e-205
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACS17113.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 431.0
  • Bit_score: 721
  • Evalue 6.70e-205

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGAATCCGAACGCGGCACCCAAGCCCGCGGAGCGCACCGGCGACGCCGCGCCGCGCTCACGCCTTTCCCGTTTCTCCCACTGGTCCGCTTCCACCACGGCGATGCTGGTCGCCCTGGCCACGGCCTTCGCCCTGAGCCAGGCCTTCCGCACCGTCGGCGCGATGATGGCCACGCCGCTCTCGCAGAACTTCGGGCTCACGCCGCAGCAGCTCGGCATGTGGGCCGGCACCTTCCATTTCACTTTCGGCGTGATGCAGCTCGGCATGGGCGTGTCGATTGACATGTTCGGGGTGCGCCGCACGGTGCTGAGCGCCTTTCCGCTGGCCATCGCGGGCGCCGTGCTGTGCACGATGGCGCCGAGCTTCCACGCACTGCTGCTGGGGCAGGCGCTGATCGGCGTCGGCTGCGCGCCCGCGTTCCTGGCCTGCACGGTGTTCATCGCGCGGCATTTCGATGCGGCGCGTTTCACCGCGATGTCGGGGCTGGTGATGAGCATGGCCGGCATGGGCATCCTGTTCACCGGCACGCCGCTGGCGCTGCTGATCGAGGCCGCCTCCTGGCGTGCAGGCTACGCGGCGCTGGCCGGGTTCGCGGTGCTCTCTTGGCTGGTCATCTTCTGGCGCGTGCGCGAACCTGCGCGCACGGTGGTGCATGACGGCATGCAGCCGGCGCCGGCGGAGCGCCAGTCGCTGCGCAAGGCGGTGCGCGAACTGCTGCCGCTGTTCGCCATGCCCCACACGCTGGGGCTGCTGTGCTTTGCCTGCGTGTCCTACGCGGCCTTCATCACGCTGCGCGGCCTGTGGCTGGGCCCGGTGCTGCACGAGCGGCACGGCCTGTCGCTGGTGGCCAGCGGCAACGTGGCGCTGGTGATGACGGTGGCCGGCATGATCAGCCCCGCGCTGTTCGGCCGCATGGACCCGGGCGGCGCGCGGCGCGGCCGCTGGATGATGGGCTGCGCCGTCGCCGGCGCGCTGATGTTCGGCGCGATGGCGCTGACGCATTCGGCGGCCATCGACATCGGCCTGCCGATCATCTACGGCCTGCTCTCGGGCTACAGCGTGCTGCAGTACGCGTACACCAAGAACGCCTATCCGGCGGAGATGACCGGGCGCGCGATGGCGCTGCTGAACATGGCGATGTTCCTCGGCGTGTCGCTGATGCAGTGGACCACCGGCGTGGCCGCGTCATGGGCGGTGACGCACGGCGCGGAGCCGTTCCGCGCGGTGTTCCTCACGGTGGCCGGCATGCTGGCCGTGGGAACGCTCGCGTTTCTCGTGCTGCCGCGTTCGCATGGCGGTCAGTCCTCCGTGAAGCGGTAG
PROTEIN sequence
Length: 440
MNPNAAPKPAERTGDAAPRSRLSRFSHWSASTTAMLVALATAFALSQAFRTVGAMMATPLSQNFGLTPQQLGMWAGTFHFTFGVMQLGMGVSIDMFGVRRTVLSAFPLAIAGAVLCTMAPSFHALLLGQALIGVGCAPAFLACTVFIARHFDAARFTAMSGLVMSMAGMGILFTGTPLALLIEAASWRAGYAALAGFAVLSWLVIFWRVREPARTVVHDGMQPAPAERQSLRKAVRELLPLFAMPHTLGLLCFACVSYAAFITLRGLWLGPVLHERHGLSLVASGNVALVMTVAGMISPALFGRMDPGGARRGRWMMGCAVAGALMFGAMALTHSAAIDIGLPIIYGLLSGYSVLQYAYTKNAYPAEMTGRAMALLNMAMFLGVSLMQWTTGVAASWAVTHGAEPFRAVFLTVAGMLAVGTLAFLVLPRSHGGQSSVKR*