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SCNpilot_cont_300_bf_scaffold_174_curated_94

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(101897..102652)

Top 3 Functional Annotations

Value Algorithm Source
Phosphonate metabolism transcriptional regulator PhnF, GntR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XLF5_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 260.0
  • Bit_score: 403
  • Evalue 1.60e-109
phnF; phosphonate metabolism transcriptional regulator PhnF, GntR family similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 260.0
  • Bit_score: 403
  • Evalue 5.20e-110
Phosphonate metabolism transcriptional regulator PhnF, GntR family {ECO:0000313|EMBL:AGU53707.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 260.0
  • Bit_score: 403
  • Evalue 2.30e-109

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGACAAGCACAACAAGCTCTCCCGCATCGCTTCCGGCCCGTTCCCCACGCGACAGTTTCTGGACCCGCATCGCCGCCGACATCGCCGACGCCATCGCGCGCGGCGTCTATCCCCCGGGGCAGCGGCTGCCCTCCGAGCACGCACTGGCAGAGCAGTTCGGCGTCAATCGACACACCATCCGCCGCTCGCTGGCCGACCTCACGAGCCAGGGCCTGCTGCGCGTCACGCAGGGCAGCGGCACCTACGTCGAGGAGTTCGCCATGGACCTGGCGCTGGTCAAGCGCCCGCGCCATCACCAGCGCATGGCGCTGGCCGGTCTTCGCGGCGCGCTGCACGTGGTGGCCGCCAGCACGGTGCGCGCCACGGCCGCGCAGGCCCGCGTGCTGGACGTGCCGGCGCGCAGCTCGCTGCTGTGCCTGAACGTCGTCGGCGATGCCGAAGGCCAGCCGCTGCACTTCAGCGAGCGCCTCTTTCCGCTGCCGCGCTTCGCCGGGCTCGAAGCGGTGGTGCGCGAGACCGGCTCCATCACCGCCGGCTTCGCGGCCCACGGCGTCGACGACTACACGCGGCGCGACAGCCGCATCACCGCGCAGATGCCCGAGCCCACGGTGGCCGCCCACCTGCGCCAGCCGGTGAGCCGGCCGGTGCTCTTCGTCGAGAGCGTCAACGTCGACACCGCCGCCGTGCCCATCGAATACGCGCGCACCTGGTTCGCCGGCGACCGCATCACGCTGACGGTGACCCACGATGAATGA
PROTEIN sequence
Length: 252
MTSTTSSPASLPARSPRDSFWTRIAADIADAIARGVYPPGQRLPSEHALAEQFGVNRHTIRRSLADLTSQGLLRVTQGSGTYVEEFAMDLALVKRPRHHQRMALAGLRGALHVVAASTVRATAAQARVLDVPARSSLLCLNVVGDAEGQPLHFSERLFPLPRFAGLEAVVRETGSITAGFAAHGVDDYTRRDSRITAQMPEPTVAAHLRQPVSRPVLFVESVNVDTAAVPIEYARTWFAGDRITLTVTHDE*