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SCNpilot_cont_300_bf_scaffold_174_curated_108

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(114362..116335)

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase Gcr n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5E1_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 660.0
  • Bit_score: 1170
  • Evalue 0.0
Site-specific recombinase Gcr {ECO:0000313|EMBL:ADU34747.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 660.0
  • Bit_score: 1170
  • Evalue 0.0
site-specific recombinase gcr similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 660.0
  • Bit_score: 1170
  • Evalue 0.0

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1974
ATGGCTGCCGCATCGCGCGACTTGCAGGGGCTGCTTGCCGGCCTCGACCCGACGGCCGATGTGGCGCAGCGCCACATCTGGCTCATCAATATCTTCGACTGGCTGCGCGGCGACCGCGCCTCGCCCCAGGCGGCCATGGGCCGCGTGCAGCTGCTGCTGGACGCCATCGAGGCGCGGCCGGAGCTGCGCGAGCGCCTGCGCGCCTGGTGGCGCGCCTTCACGCAGTCGGTCGACCTGACCACGCTGCTGGCCGACTACGGCTTCGCGCCGCGCACCGCCTTCGCCAGCGAGCTGAGCGAGCGGCTGCGCCGCAAGATCCTGCCGGGCACGCCCGAGACTACCGACGCGTCGGACCTGTTCCGCATGGTGCTGCCCGGCGTGTTCGACGCCGGCTGGATCGCGCTGCTCGACGAGACGCAGCTCGCGCGCATCGGCGCGCTGCTGGCCGACGCCGCCATCGACGAGGACGGCGCCCCGCGCTGGCGCCACACGGTGATGGACGCCGTGACCTACTGCGCCAGCCAGGTGGTGGCCACCGGCTTTTCGCCCGAGCTGCGGCTGCGCATGAGCCCCGAGCTCGGCGCGGGGCGCCCGTTCCACGCGCTGATGGCCGACCTGGACGGCCTGCGCGAGCAGATGTTCGCGCAGCCGCGCGACGACCAGGCGCTGCAGGCCGCCTTCGTGGTGTTTCGCGACCGGCTCGACGCCTGCCGCGCCGTGACTTCGTCGGTCTACACGCACCTGGAGGACAACGGCATCTCGGTGGGTCTGGTGTTCCGGCTGCGCCAGTTGCGCGAGCGCGTGCTGCGCATCCGCGAACTGCTCGACTGCCTGATGTCGCCCAGCGCCGGGCCCAGCGTGGCTCGGCTGGTCGGCCGGCTGGTGCTGGCGGGCGGCGAGCGCAACAGCATCCGCGCGCTGATCGCCTCCAATTCGTCGATGCTGGCCGCCAAGGTGACCGAGCGCAGCGCCGAGACCGGCGAGCACTACATCACCCGCGACCGCGCCAGCTATGCGCGGATGGTGAAGAAGGCCGCCGGCGGCGGCGCGCTCACCTCCATCACGGTGCTGCTGAAGTTCGGCATCTACGCGCTGGGCCTGTCGGCCTTCTGGAGCGGGCTGGCAGCGGGCCTCATGTACGCGGCGAGCTTCGTCGCCATCCAGCTGCTGCACCTGACGCTGGCCACCAAGCAGCCCGCCATGACGGCGCCGGCGCTGGCGGCGCGGCTGCGCGACATCAAGTCGGACGGGGCGGTGGACGGCTTCGTCGACGAGGTGGCCAACCTGGTGCGCTCGCAGGTGGCGGCGGTGCTGGGCAACGTGCTGGTGGTGGTGCCGGCGATGGCGGCGGTGGCGCTGCTGATCCAGCTGGCGCTGGGCCGGCCGCTGCTCGACGCGGCGCATGCCTCGGCCACGCTGAATTCGCTGTCGCTGGCCGGGCCGACCGCGCTTTATGCGGCATTCACCGGCATCCTGCTGTTTTCGGCCAGCATCATCGCCGGATGGACAGAAAACGCCTTTGTCCTGCACAGACTGGACTCCGCCATGCGTTACAACCCTCGCATCGGCGCTTTTCTGGGTGCCGCACGGGCTCGCCGCTGGGCCGACTTCATGCGCACACACATCTCGGGCTTCGCCTCCAACATCTCGCTCGGCCTCATGCTCGGCCTCCTGCCCGCGTTCGCGGGTTTCTTCGGGCTCGGGCTGGATGTGCGCCACGTGACACTGTCGGCCGGGCAAATCGCCGCGGCCGCGGCGTCCACGGGCCTGGCGGTGCTGCAGCAGCCCGCGCTGTGGTGGGCGGTGGCGGCCATCCCGGTGATCGGCGCGCTCAATGTGAGCGTGAGTTTCTATTTCGCTTTCCGGCTGGCGCTGCGCGCGCACAGCGTGAGCCTCAGTGACCGCGCGCGCATCCGCAGCGCGATCTGGGCACGCTGGCGCAGCCGGCCGGTGAGCTTCTTCCTACCTGCATGA
PROTEIN sequence
Length: 658
MAAASRDLQGLLAGLDPTADVAQRHIWLINIFDWLRGDRASPQAAMGRVQLLLDAIEARPELRERLRAWWRAFTQSVDLTTLLADYGFAPRTAFASELSERLRRKILPGTPETTDASDLFRMVLPGVFDAGWIALLDETQLARIGALLADAAIDEDGAPRWRHTVMDAVTYCASQVVATGFSPELRLRMSPELGAGRPFHALMADLDGLREQMFAQPRDDQALQAAFVVFRDRLDACRAVTSSVYTHLEDNGISVGLVFRLRQLRERVLRIRELLDCLMSPSAGPSVARLVGRLVLAGGERNSIRALIASNSSMLAAKVTERSAETGEHYITRDRASYARMVKKAAGGGALTSITVLLKFGIYALGLSAFWSGLAAGLMYAASFVAIQLLHLTLATKQPAMTAPALAARLRDIKSDGAVDGFVDEVANLVRSQVAAVLGNVLVVVPAMAAVALLIQLALGRPLLDAAHASATLNSLSLAGPTALYAAFTGILLFSASIIAGWTENAFVLHRLDSAMRYNPRIGAFLGAARARRWADFMRTHISGFASNISLGLMLGLLPAFAGFFGLGLDVRHVTLSAGQIAAAAASTGLAVLQQPALWWAVAAIPVIGALNVSVSFYFAFRLALRAHSVSLSDRARIRSAIWARWRSRPVSFFLPA*