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SCNpilot_cont_300_bf_scaffold_174_curated_113

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 119014..119985

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein PMI12_01114 n=1 Tax=Variovorax sp. CF313 RepID=J3CUD6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 326.0
  • Bit_score: 579
  • Evalue 2.10e-162
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 326.0
  • Bit_score: 579
  • Evalue 3.00e-162
ku protein; K10979 DNA end-binding protein Ku similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 332.0
  • Bit_score: 563
  • Evalue 5.00e-158

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGCCAGTCTCTAAGAAAGCCCCCGCGCCGCGCGTCCTGTGGAAGGGCGCGATCAGCTTCGGCCTGGTCCACATTCCGGTCGCGCTGTATTCGGCCACCACCGACCACGGCATCGACTTCGACTGGCTCGACAAGCGCACCATGGACCCGGTCGGCTACAAGCGCATCAACAAGAAGACCGGCAAGGAAATAGCGCGCGAGCAGATCGTCAAGGGCATCGAGTACGAAGACGGCGAGTACGTCGTGCTCAGCGACAAGGAAATTGCCGCCGCCTACCCCAAGACCACGCAGACCATCGAGATCGAGACCTTCGTGCCGGCCGACGGCATTCCCTTCGTCTACCTCGAGCGGCCTTATTACGTGGCCCCCATCAATCGCGGCGCCAAGGTTTACGCGCTGCTGCGCGAGACCCTGCAACGCAGCGGGCGCGTGGGCGTGGCGCGCGTCGTCATCCAGACCAAGCAGCATCTTGCAGTGCTGGTGCCCGCGGGCCCCGGCCTGGTGCTCAACCTGCTGCGCTGGGGCGCCGACATCCGCCCCTGGACCGACCTGCCGCTGCCCTCCGAAGACGCGAAGAAGGCCGGCCTGAGCGAGCGCGAACTCAAGATGGCCAAGGAACTGGTCGACGACATGAGCACCGACTGGGACCCCGACGAATTCAAGGACGAGTTCAAGGACGAGATCCTCCGGCTGGTCGACAAGAAGGTGAAAGCCGGCCAGACCGAGACCGTCACTCAGCCCGAGCCCGAGGAATCGCAATCCACCGAGGGCCGCGGCGCCAAGATCATCGACCTGACCGAGCTGCTGCAGCGCAGCCTGCGTGGCAAGGGCGGCAAGACGGCCAAGGCCGCGGCCGCCGATGAGGAAGACGAAGAAGATGAGGCACCTCCTCCCAAGGCCGCGGCGAAGAAGCGCAAGCCGGCCGCCAAGGCCGCGCGCAAGGCGCCGGTGCGCCACCGCAAGGCAGCCTGA
PROTEIN sequence
Length: 324
MPVSKKAPAPRVLWKGAISFGLVHIPVALYSATTDHGIDFDWLDKRTMDPVGYKRINKKTGKEIAREQIVKGIEYEDGEYVVLSDKEIAAAYPKTTQTIEIETFVPADGIPFVYLERPYYVAPINRGAKVYALLRETLQRSGRVGVARVVIQTKQHLAVLVPAGPGLVLNLLRWGADIRPWTDLPLPSEDAKKAGLSERELKMAKELVDDMSTDWDPDEFKDEFKDEILRLVDKKVKAGQTETVTQPEPEESQSTEGRGAKIIDLTELLQRSLRGKGGKTAKAAAADEEDEEDEAPPPKAAAKKRKPAAKAARKAPVRHRKAA*