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SCNpilot_cont_300_bf_scaffold_174_curated_123

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 135586..141024

Top 3 Functional Annotations

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Value Algorithm Source
hemagglutinin n=1 Tax=Variovorax paradoxus RepID=UPI0003757F84 similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 999.99
  • Bit_score: 1879
  • Evalue 0.0
Variovorax paradoxus strain MEDvA23 contig_98, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ20301.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 999.99
  • Bit_score: 1692
  • Evalue 0.0
filamentous hemagglutinin family outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 999.99
  • Bit_score: 1584
  • Evalue 0.0

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 5439
ATGAAGCAACGCAACCGGTTTTCTCAACGGCGGCTTCAGTTGCGCCCGCTCGCGCTGTCGCTCGTCTGCGCGGGTGTGGGCGCGGGCGCCGCGCCGGCCATGGCCCAGGTGTTGCCCTCGGGCTTCACGCCCATTGCCGGCGGCGTCACGATGACGCAGGGCGTCGGCACGATGAACATCGTGCAGCCGCTGCAGCGCGGCATCGTCAACTGGCAGAGCTTCTCGATCGGCGCGGGCGGCCTGGTCAGCATCTCGCAGCCGAGCACCTCGGCCGTGCTGCTGAACCGCGTGGTGGGCGACGGCATGAGCATCCAGGCCTCGCGCATCGACGGCGCGCTGCGCACCACGCTCGCGGGCAACCCGAACCTGCCGGGCGGCAGCGTGTTCCTCATCAACCCGAGCGGCATCGTCTTCGGCAAGGGCGCATCGGTGAACGTGGGCGGGCTGGTGGCGTCCACGCTCGACATCGCCAACAGCAACTTCATGCCCGCCGGCTCGGAGGACAAGGCCATCGGCAGGAACGAGCAGCTGCTCTTCTTCGGCCCCGAGGGCAGCATGGCCCAGGTGAAGGTGGAGGGCGGCGCGTCGATCACCACAACCTCGCCCGGCGGCACGGTGGCGCTGCTGGGCGGCGTGGTGCGCAACGAGGGCGAGATCAACGTCGCGCGCGGCTCGGTGGGTCTGGTGTCGGCCAGCAAGGTGACGCTGAACCTCGACTTCGACGGCGACGGCCTCACCACCTTCAACATTCCGGCCGACGGCCAGACCAAGTTCAAGCTCGCCGACCTGCAGGCCGCCGACCCCACGGCGGTGGCGCAGTTGGCGAACAGCGGCAAGGTCGCGGCCGACGGCGGGCGCGTGGTGCTGATGGCGGCGGCGAACGTCGACGCGCGCCAGCTGGTGGTGAGCCAGACCGGCGTGATCCAGGCGCGCTCGCTGTCCACCCGCAACGGCGAGATCGTGCTCGACGCCAGCCGTGCGCCCGGCGGCAACAACGAGGTGCGGATAGGCGGCACCATCGACGCCGGCACCGGCGCGAGCGAGGCGGGTGCCTCGGGCAGCACAGGCGGCTCGGTGACGCTGCGCGGCGACTACATCCGGCTGGCCAGCGGCGCCAGCGTGGACGCCAGCGGCACCGGCGGTGGCGGCACGGTTTCCGTGCAGGCTTCGCGCGCGGTGAGCATGGCGCCCGACGCCGCCATCTCCGCCAACGCCACGGGCGCCAACGGCACCGGCGGCAGCATCGGCATCGACGCTTCTTCCACGCACATCTCAGGCAGCCTTTCCGCGCGCGGCGCGGGCAGCGGCAACGGCGGCGCCATCGCCACCTCGGGCGACCAGCTCGAAGTGACCGACACCGCGCGCATCGACGCGGCGGGCGGCACGGGCGGCGCCAACGGCAGCTGGACGGCGCTGGCGCGCGGCACGCTGAACGTGGACGGCAACGCGGCCGCCTATGACCCCAACGGCTACGCCGACCTGGGCAACGGCACGCACGTCAGCGCATCGGCCATCGGCGCCACGCTGGGCCGCGCGACCGACGTCAACCTGCGCACGGCGCTCTCCGAGGGCAGCTCCGACGTGGTGTTCCAGGACGGCGTGCAGGTCCTGAAGTCCGAAGGCCGCGACGCGCGCCTCACGGTGGATTCGGCCAACGGCATCGCCATGAACAGCGGCGCGTCGATCCAGTCGACCGCCGGCGCGCTCGCGGTCAACTTCGACGCCAATGCCGACGCCAACGAGATCGGCGGCGCCATCCGCATGGACAACGCGAGCATCGCCACCAACGGCGGCAGCATCCGCTTCTACGGCCAGGGCAATGCCGACACCGGCCGCGCGGTCGGTGGCATGTCCGTCGACGACGGCGGCAACAGCAGCGGCGTGGCCGGGATCACGCTCACCGACAGTTCGCTCTCGACCTGCGCCACCGGCGCGGGCGGATGCGGAGGCAGCGGCGTCATCGTGCTGCGCGGGCAGGGCGCGAGCCGGCAGGCCAACGGCACGGCCGACTACTACGTCAGCTCCGACGGCGTGGAGGTGCGCGGCAGCAGCCTGAGCACCGGCGCCGGCGGCATCGCCATCGACGGCCAGAGCGGCATCGGCGCCAACGGCGTGCTGCTGGCCGGCACCGAAGGCGGTGCGACGCAGCTGCGCACCGGCAGCGGCGACGTCAGCGTGATCGGCAGCTCGCGCAGCTGGACGACCGACGACCCGGGCGCCGTGTACGGCAGCACAGTGACGCCCTACGGGCCCGACGGCAGCATGTCGGCGCCTGACGTGACGGTGGCCGTCACGGCCGGTGTGACGCTGCGCGGCGCGGTCATCGACGCCGGCGGGCGCGTGGGCATCGACGGCACCGGCGCCAACCTGCAGGGCCTTGCTGCGAGCGACGCCTTCATGACTTCCGCTCAGGCCGCCAACAACGGCACCGGCGTCGGCTACGGCGCGGGCGACGGCGTGGCCATCAACGGCGGCAGCATCACGGCCGGCAAGGGGCGCGACATTTCCATCGCGGGCACCGCGGGCGGCCAGGGCTTCAGCGTGCGCAACGGGGGCGTGACGCAAGGGCAGGCGCCCTCGGCGGTCAGCATTTCGATGGAGGCCGGCGAGACGGTGCGCGCCGAGGGCGGCAGCGTGTCGATCGACGGCCGAGGCGGCGACGTGACCGTGGCGCGCGTGCTCAGCCGCGGCGACCTTCCGCCCGGCGCGACCAACGCGCTGATCGACACCTCCAGCACCACCGGCGCCGGCGGCACGGTCACCGTCACCGGGCGCAACGTGCTGGTGAGCGACGTGTACAGCGACCTGACCACCATCGACGCGGGCGGCGCCGGGCAGGCCGGCACCATCGACATCCGGGGCAGCAACGCCATCGCCATCGACGCATCGGCGAGCCTGCGCGCGGATGCGAATTCGGCCAGCGGCAACGGCGGCACGGTGCGCGTGATCGCGGGCGACACGCTGCGCGGCTATGGCAGCCTGTCGGCGCGCGGCGGCAGTGCGGGCGGCAACGGCGGCACCATCGAGACCTCGGCGCCGCACTTCGAGCTGCTGGGCCTGCGCGTCGACGCCTCGGCGCCGATGGGCACCGCCGGCTCATGGGTGATCGACCCGTACGACGTGACCATCGCGCACGGCACCGCCTCGGGCAGCCTCACGGGCAACCCCTTCGATCCGCTGGCCAATTCGACCGTGCAGGACGGCGACATCAACGCCGCGCTGGACGGCGGCACCAGCGTGACCATCACCACCGGCACCGGCGGCAACCCGGCGGCCGGCAACATCACTTTCGCGGCCGGCGCGTCCATCGTGCGCAGCAAGGGCGCCGCGCCGCTGACCTTCGAGCTCGACGCGGCGCACAGCATCGGCACCAGCGGCGGCGCGAGCATCCAGTCGAACTCGGGCGCGCTCGACGTGGTGTTCAACGCGGGCGTGGGCGGGCAGGGCGGCGCCATCAACTACAACGGCGTCATCAACACCAACGGCGGCAACGTGACGATGAACGCCGATGCCGGCGCCAGCAGCACGCCGGCCATCACGATGAACGGCACCAGCATCGACACCCGCACCACCGCGCTGGGCGACGCCGGACCCGGCGGCTCGGTGCGGATCAGCGGCAGGCGCACGCTGCCGGCCTCCATCTTCAACACGCAGGCCACGGTCGACCTCACGGGCATCAGCATCCAGAGCAGCACCGGCGACGTGTCGATCTCGGGCGTGGGCCAGCACGGCGACGGCGTGCGCATCCAGGGCGGCTCGACGCCCAGCCAGATCCTCACGACCAGCGGCGACATCGACATCCTCGGCGTGGGCGCGAGCTACACCTACAGCCAGTCGCAACTGGCGGTGCAGAGCGTGGAGATCAACGGCGCCACGCTGCGCAGCGTGGACGGCAACATCGGCATCCGCGGCCTCGTCACGCCCGGTCCGCAGGACGCATCGTCGGGCGGCGTGCTGCTGGCGGGCAACGCGCTGGTGACGACGCTGGGCGTGGGCAACATCGACATCGCCGGCGAGTCGCAGGCCAACGGCACGGGCGTGAACATCGTCAAGGGCGCGCAGGTGATCGGCAACCGCGACGTGGTGCTGCGCGCGAGCAACGACGGCACGAGCGACGCCATCGCCATCGGCGGCAACGTGCATGCGAGCGGGGTGCTCAACCTGCGCCCCGGCGGCGTGGACGCGGCCAGCGGCAACGCGGTGGACCGCACGGCCAACCCGGTCACGCTGGGCGGCACGGCGGCCACCGGCTTCGCGCTGTCGGCCGACGAGTTCGGCCGGCTCGACGCGCCCACCATCGTGGTGGGCAGCAACGCGCATGCGGCGGACATCGACGTGGTGGGACCGCTGTCTCTGTCCTCGGCGCTCACGCTGCAGAACGAGGGCGGCGGCAACATCAACCTCGGCGGCGCGCTCACCGCGCCGAAGATCGGCCTGCTCTCGCGCGGCAGCATCACGCAGACCGCCGCCGCGCCCATCACGGCCGGCACGCTCATGGCGCGCTCCACCGGCGGCAGCGTGCTGCTCGACCAGGCCGCAAACAACGTCAGCGCGGCCACCGTGGGTGGCGGCGCGGCGGGCGCCTTCCGCTATGTCGATGTCGACACGGTGCAGCTGGGGTCGGTGTCCGTCACCGGCTTCGATGCGGCTGGCAATGCGCCGCAGGTGGCGTCGGCCACCTCGATGGCTGCGGACACCGTGTTCGTTCGCACGCTCAGCGGCGACCTGCTGTTGGGCACCAACGTGAGCAGCACCAACGGCACCGACCTGGTGGCGGGTTCACGCCTGCAGAACCTGGGCGGCTACACCATCACCGGCGCGCCCTGGCGCGTGTGGGCCGACACCTGGGTGGGCGAGACGCGCGGCGGCCTGCAGGGCTCGGGCATCTACCCCAACCTGTACCACTGCGCCTACTCGGGCCTGTGCGCGGTGAGCATTCCCGCCGGGGCCAACCATTTCATCTATGCGCAGCAGCCGGTGGCCACGGTGGTCATCGGCGACGCGAGCCGGCCCTTCGGCTTTCCGAACCCGCTGTTCAGCTACGGCATTGGCGGGCTGATCCTGGGCGACACCGGGCGCGGCTTCGCCGGCACCATGAGTTCGCCGGCGTTGCCGGGCAGCCTGCCGGGCCTGTACCCGATCAACGGCACGTTCACGTCGGCGGAAGGCTATGCGGTCAACGTGGTGCCGGGCAACCTGCTCGTCACCGCGGCGCCCAACCTGCAGCTGCCCGACGTGGTGCGCGAGCTGCCCAGCACCTGGCTGTACGACCGCAACATGGGCCCGCCGCCGATCTGCTTCGCAACCGGCCCGCTCGACGGCGACCGCGCCGCGCAGGGCGGCGACGTGCTGGCGCGCGAATGGTCGCGCGTGCGTTCGCGGCCCAACCTCTCGAGCTGCGTCGACACCGACAAGCGCAACGGCTGCTCGGACTTCTGA
PROTEIN sequence
Length: 1813
MKQRNRFSQRRLQLRPLALSLVCAGVGAGAAPAMAQVLPSGFTPIAGGVTMTQGVGTMNIVQPLQRGIVNWQSFSIGAGGLVSISQPSTSAVLLNRVVGDGMSIQASRIDGALRTTLAGNPNLPGGSVFLINPSGIVFGKGASVNVGGLVASTLDIANSNFMPAGSEDKAIGRNEQLLFFGPEGSMAQVKVEGGASITTTSPGGTVALLGGVVRNEGEINVARGSVGLVSASKVTLNLDFDGDGLTTFNIPADGQTKFKLADLQAADPTAVAQLANSGKVAADGGRVVLMAAANVDARQLVVSQTGVIQARSLSTRNGEIVLDASRAPGGNNEVRIGGTIDAGTGASEAGASGSTGGSVTLRGDYIRLASGASVDASGTGGGGTVSVQASRAVSMAPDAAISANATGANGTGGSIGIDASSTHISGSLSARGAGSGNGGAIATSGDQLEVTDTARIDAAGGTGGANGSWTALARGTLNVDGNAAAYDPNGYADLGNGTHVSASAIGATLGRATDVNLRTALSEGSSDVVFQDGVQVLKSEGRDARLTVDSANGIAMNSGASIQSTAGALAVNFDANADANEIGGAIRMDNASIATNGGSIRFYGQGNADTGRAVGGMSVDDGGNSSGVAGITLTDSSLSTCATGAGGCGGSGVIVLRGQGASRQANGTADYYVSSDGVEVRGSSLSTGAGGIAIDGQSGIGANGVLLAGTEGGATQLRTGSGDVSVIGSSRSWTTDDPGAVYGSTVTPYGPDGSMSAPDVTVAVTAGVTLRGAVIDAGGRVGIDGTGANLQGLAASDAFMTSAQAANNGTGVGYGAGDGVAINGGSITAGKGRDISIAGTAGGQGFSVRNGGVTQGQAPSAVSISMEAGETVRAEGGSVSIDGRGGDVTVARVLSRGDLPPGATNALIDTSSTTGAGGTVTVTGRNVLVSDVYSDLTTIDAGGAGQAGTIDIRGSNAIAIDASASLRADANSASGNGGTVRVIAGDTLRGYGSLSARGGSAGGNGGTIETSAPHFELLGLRVDASAPMGTAGSWVIDPYDVTIAHGTASGSLTGNPFDPLANSTVQDGDINAALDGGTSVTITTGTGGNPAAGNITFAAGASIVRSKGAAPLTFELDAAHSIGTSGGASIQSNSGALDVVFNAGVGGQGGAINYNGVINTNGGNVTMNADAGASSTPAITMNGTSIDTRTTALGDAGPGGSVRISGRRTLPASIFNTQATVDLTGISIQSSTGDVSISGVGQHGDGVRIQGGSTPSQILTTSGDIDILGVGASYTYSQSQLAVQSVEINGATLRSVDGNIGIRGLVTPGPQDASSGGVLLAGNALVTTLGVGNIDIAGESQANGTGVNIVKGAQVIGNRDVVLRASNDGTSDAIAIGGNVHASGVLNLRPGGVDAASGNAVDRTANPVTLGGTAATGFALSADEFGRLDAPTIVVGSNAHAADIDVVGPLSLSSALTLQNEGGGNINLGGALTAPKIGLLSRGSITQTAAAPITAGTLMARSTGGSVLLDQAANNVSAATVGGGAAGAFRYVDVDTVQLGSVSVTGFDAAGNAPQVASATSMAADTVFVRTLSGDLLLGTNVSSTNGTDLVAGSRLQNLGGYTITGAPWRVWADTWVGETRGGLQGSGIYPNLYHCAYSGLCAVSIPAGANHFIYAQQPVATVVIGDASRPFGFPNPLFSYGIGGLILGDTGRGFAGTMSSPALPGSLPGLYPINGTFTSAEGYAVNVVPGNLLVTAAPNLQLPDVVRELPSTWLYDRNMGPPPICFATGPLDGDRAAQGGDVLAREWSRVRSRPNLSSCVDTDKRNGCSDF*