ggKbase home page

SCNpilot_cont_300_bf_scaffold_174_curated_144

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 169350..170396

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein, VC_A0111 family n=1 Tax=Variovorax sp. CF313 RepID=J2K4H8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 344.0
  • Bit_score: 674
  • Evalue 5.30e-191
Type VI secretion protein, VC_A0111 family {ECO:0000313|EMBL:EJL75070.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 344.0
  • Bit_score: 674
  • Evalue 7.40e-191
type VI secretion protein; K11895 type VI secretion system protein ImpH similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 344.0
  • Bit_score: 643
  • Evalue 3.10e-182

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
GTGCGGGACGCGCCAGATTCTGTGAACGTGCGCGTCGATGCCGCGCTGCGCGAGTGGTCGGCCGAGCCGTGGGCCTTCGACTACTTCGCCGTGATGCGCCGGCTGGAATCGGTGGCCAGGACCACGCCGCGCTGGGGCCGCGCGCTGCTGCCGGGCGCCGAGCCGGTGCGCGTGGGGCAGGAGCCGTCGCTGTCGTTCGCGCCCGCGAGCTTCAGCCGCTTCGAGCCCGCCACGGCGCATTCGCCGCCGCGCCTGCGCCAGCAGTTCTTCGGCTACATCGGACCCAACGGGCCGCTGCCGGTGCACCTGAGCGACTTCATCCGCGAGCGCAGCCTGAACCATGGCGACCCGACGTGGCTGGCGTTCCTCGACAGTTTCTCGCACCGCTTCTCGCTGCACTTCTATCGCGCCTGGGCGCAGTCGCGGCCCGCCGTGGCGCTGGACCGGCCGGGCGAAGACCGCTTCCGGCTGCAGGTGGGCGCGCTGGTGGGCATCGGCACGCCGGGGCGCGTGGCGCGCGACCAGATCCACGACGACGCGCGGCTGCACTTCTCGGGCTGGCTCGCGCGGCGCGTGCACAACGCGGAGAGCGTGGAGTCGGTGCTGTGCAGCTACTTCGGCGTGCCTGTGAAGCTGGAGCGCTGGGTCGGCCACTGGATGAGCCTGCCGGCCGCGGAACTCACGCGGCTGGGGCGCGGCGAGAGCTCGCGCTCGATGGGCATGGGCGCGATGCTGGGCACCCGCGCCTGGGACCGCCAGCACCGCGTGCGCCTGCACCTGGGGCCGCTCACGCTCGAGCAGTACCGCATGTTCCTGCCGACCGGTGACGCGCGCGCGGTGCTCCAGCGCTGGATGCTGCAGCTGCTCGGCGGCGAACTCGAATGGGACGCCGAACTGGTGCTCCAGAAACAGCAGGTGCCCGCCACGCGCCTGGGCGAGGCGAAGGGCAACGGCCCGCGCCTGGGCTGGGTCTCGTGGCTGGGGCAGCGCACGCGCGCGAGGGACGCGGCGGACGTGCGCATCGGCAGCCAGGGCGTCTTTCAATAA
PROTEIN sequence
Length: 349
VRDAPDSVNVRVDAALREWSAEPWAFDYFAVMRRLESVARTTPRWGRALLPGAEPVRVGQEPSLSFAPASFSRFEPATAHSPPRLRQQFFGYIGPNGPLPVHLSDFIRERSLNHGDPTWLAFLDSFSHRFSLHFYRAWAQSRPAVALDRPGEDRFRLQVGALVGIGTPGRVARDQIHDDARLHFSGWLARRVHNAESVESVLCSYFGVPVKLERWVGHWMSLPAAELTRLGRGESSRSMGMGAMLGTRAWDRQHRVRLHLGPLTLEQYRMFLPTGDARAVLQRWMLQLLGGELEWDAELVLQKQQVPATRLGEAKGNGPRLGWVSWLGQRTRARDAADVRIGSQGVFQ*