ggKbase home page

SCNpilot_cont_300_bf_scaffold_174_curated_145

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 170436..173165

Top 3 Functional Annotations

Value Algorithm Source
ATPase AAA n=1 Tax=Variovorax paradoxus RepID=UPI00036BB7E0 similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 909.0
  • Bit_score: 1747
  • Evalue 0.0
Type VI secretion ATPase, ClpV1 family {ECO:0000313|EMBL:ACS17193.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 909.0
  • Bit_score: 1737
  • Evalue 0.0
type VI secretion ATPase, ClpV1 family; K11907 type VI secretion system protein VasG similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 909.0
  • Bit_score: 1737
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2730
ATGAGTGAAATCAGCCGCACCGCACTTTTCGGCAAGCTCAATTCGCTGGCCTACAAGGCCATCGAGGGCGCGACCGTGTTCTGCAAGATGCGGGGCAATCCATACGTGGAGCTGGAGCACTGGTTCGCCCAGCTGCTGCAGGCGCAGGACTCCGACCTGCACCGCGTGATCCAGCACTACGGCCTGGACGTGTCGGTCATCGCCAAGGACATGACCGCCGCGCTCGACCGCCTGCCGCGCGGCGCCACCGCCATCAGCGACTTCTCGCCGCACATCGAGAACGCCATCGAGCGCGCCTGGACCTATGCCACGCTGCAGTTCGGCGAGGCGCAGGTTCGCACCGGCTACATCCTGGTCGGCATGCTGAAGACGCAGAGCCTGCGCAATCCGCTGTTCGGGCTGTCGAAGCAGTTCGAGAAGGTGAAGGTCGAGGACCTGGCCGACAACTTCGCGAAGATCTGCGATGCCTCGCCCGAGGCGCAGATGCGCGCGCAGGACGGCACCGGCATGGGCAGCGGCGCGCCGGGCGAGGACGCCGGCGCGATGGCGCCGGCCGCCATGGGCAAAGGCGACGCGCTGAAGAAGTTCGCGGTCGACCTCACCGAGAAGGCGAAGAAGGGCGAGATGGACCCGGTGACGGGCCGCGACGAGGAGATCCGCCAGATCGTCGACATCCTCATGCGCCGCCGCCAGAACAACCCGCTGCTCACCGGCGAGGCCGGCGTCGGCAAGACGGCGGTGGTCGAAGGCTTCGCGCAGCGCCTGGCGCGCGGCGACGTGCCGCCGCAGCTGAAGGACGTGAAGCTGCTCACGCTCGACATCGGCCTGCTGCAGGCAGGCGCGAGCATGAAGGGCGAGTTCGAGCAGCGCCTGCGCCAGGTGATCGACGAGGTGCAGAGTTCGCCCACGCCCATCATTCTTTTCATCGACGAGATCCACACGCTGGTGGGCGCGGGCGGCGCGGCCGGCACCGGCGACGCGGCCAACCTGCTCAAGCCTGCACTGGCGCGCGGCAACCTGCGCACCATCGGCGCGACCACCTGGGCCGAGTACAAGAAATACATCGAGAAAGACCCGGCGCTCACCCGCCGCTTCCAGGTGGTGCAGGTGCCCGAGCCCGACGAGCAGAAGGCGATCCTGATGCTGCGCGGCGTGGCCAGCGTGCTGGAGAAGCATCACCGCGTGCAGCTGCTCGACGAGGCCATCGAGGCGGCCGTGAAGCTGAGCCACCGCTACATTCCCGCGCGCCAGTTGCCCGACAAGGCCGTGAGCCTGCTCGACACCGCCTGCGCGCGCGTGGCCGTGTCGCAGCACGCGACGCCGCCCGAGGTGGAAGACTGCATGCGCCGCATCGAAGGGCTGACGGTGGAGCAGGAGATCATCGGCCGCGAGGAAGCTATCGGCATCGACGTAACCAAGCGCGCCGCTCAGGTGGCCGCGCTGCTGGCCGAGTCGAAGGTGCAGCTCGATGCGCTGAATGCGCGGTGGCAAGAAGAGAAGGGGCTGGTCGATCGGCTGCTGGAGTTGCGTGCCAAGCTGCGGGCGGGCAACAAGCCGGTGGATTCAGTCAAGGCCGACGGCGATGCCAAGGCCGACGTGCCCCCACCCCAACCCTCCCCCAGTGGGGGAGGGAGTGAGGACCGGGCTGCGCTGCTTGCGGAGCTGCACGAACTGCAGGCGAAGATCCACGCGGTGCAGGGCGAGTCGCCGCTCATCTTGCCGTCGGTCGACGAGCAGGCCGTGGCTTCGGTGGTGGCCGACTGGACCGGCATTCCCGTCGGACGCATGGTGAAGAACGAGGTGGAGGCTGTGCTCAAGCTCGCCGACACGCTCAACCAGCGCGTGATCGGCCAGAAGCACGGGCTGGAGATGATCGCGCGGCGCATCCAGACCTCGCGCGCGCGGCTGGACAACCCGCAGAAGCCCATCGGCGTGTTCATGCTCTGCGGCACCTCGGGCGTCGGCAAGACCGAGACCGCGCTCGCGCTGGCCGAGGCGCTGTACGGCGGCGAGCAGAACATCATCACCATCAACATGAGCGAGTTCCAGGAGGCGCACACCGTCTCCACGCTCAAGGGCGCGCCTCCGGGCTACGTGGGCTACGGCGAAGGCGGCATCCTCACCGAGGCGGTGCGCCGCCGGCCCTACAGCGTGGTGCTGCTCGACGAGGTGGAGAAGGCCCACCCCGATGTGCACGAGATCTTCTTCCAGGTGTTCGACAAAGGCTGGATGGAAGACGGCGAGGGCCGGATGATCGACTTCAAGAACACCATCATCCTGCTGACCACCAACGCCGGCAGCGAGCTGGTGATGAGCATGTGCCGCGACCCCGAGCTGCTGCCCGACTCGAATGCGCTGGCCGACGCCCTGAAGGCGCCGCTCATGAAGGTGTTCCCGCCCGCGCTGCTGGGCCGCATCGTCACCATTCCCTACTACCCGCTGTCGCCGGACATGATGAAGAAGATCGTGCGGCTGCAGCTGGGCCGCATCAAGAAGCGCGTGGAAGCCAACCACGGCGTGCCCTTCGACTACAGCGACGCGGTGGTCGACCAGGTGGTCGCGCGCTGCCAGGACCCGGAGTCGGGCGGGCGGGTGATCGACGCGATCCTCACCAACACCGTGCTGCCGACGATCTCCGTCGAATACCTGCAGCGCCTGGCCTCCGGCGGCGAGATCCGCCGCGTGGCATTGGACGTGAAGGACGCCGACTTCACCTACGCCTTCGACTGA
PROTEIN sequence
Length: 910
MSEISRTALFGKLNSLAYKAIEGATVFCKMRGNPYVELEHWFAQLLQAQDSDLHRVIQHYGLDVSVIAKDMTAALDRLPRGATAISDFSPHIENAIERAWTYATLQFGEAQVRTGYILVGMLKTQSLRNPLFGLSKQFEKVKVEDLADNFAKICDASPEAQMRAQDGTGMGSGAPGEDAGAMAPAAMGKGDALKKFAVDLTEKAKKGEMDPVTGRDEEIRQIVDILMRRRQNNPLLTGEAGVGKTAVVEGFAQRLARGDVPPQLKDVKLLTLDIGLLQAGASMKGEFEQRLRQVIDEVQSSPTPIILFIDEIHTLVGAGGAAGTGDAANLLKPALARGNLRTIGATTWAEYKKYIEKDPALTRRFQVVQVPEPDEQKAILMLRGVASVLEKHHRVQLLDEAIEAAVKLSHRYIPARQLPDKAVSLLDTACARVAVSQHATPPEVEDCMRRIEGLTVEQEIIGREEAIGIDVTKRAAQVAALLAESKVQLDALNARWQEEKGLVDRLLELRAKLRAGNKPVDSVKADGDAKADVPPPQPSPSGGGSEDRAALLAELHELQAKIHAVQGESPLILPSVDEQAVASVVADWTGIPVGRMVKNEVEAVLKLADTLNQRVIGQKHGLEMIARRIQTSRARLDNPQKPIGVFMLCGTSGVGKTETALALAEALYGGEQNIITINMSEFQEAHTVSTLKGAPPGYVGYGEGGILTEAVRRRPYSVVLLDEVEKAHPDVHEIFFQVFDKGWMEDGEGRMIDFKNTIILLTTNAGSELVMSMCRDPELLPDSNALADALKAPLMKVFPPALLGRIVTIPYYPLSPDMMKKIVRLQLGRIKKRVEANHGVPFDYSDAVVDQVVARCQDPESGGRVIDAILTNTVLPTISVEYLQRLASGGEIRRVALDVKDADFTYAFD*