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SCNpilot_cont_300_bf_scaffold_174_curated_176

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 206397..207788

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI000363A327 similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 462.0
  • Bit_score: 901
  • Evalue 4.60e-259
transcriptional regulator, GntR family similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 463.0
  • Bit_score: 884
  • Evalue 1.10e-254
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AGU47770.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 463.0
  • Bit_score: 884
  • Evalue 4.80e-254

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1392
ATGACTACCATCACCGCCCACTGGCGCAGGCAGCTGCGCAACAGCGCCCGACCTGCCTATCTGCAGCTGGCCGAGCTGATCGCCGACGACATCAAGACCGGCCGCCTCGGCGTGCGCGACCGGCTGCCCACGCTGCGCGAACTGGCGAACGACCTGGAGCTGAACTACACGACGGTGGCGCGCGGCTATGCCGAGGCGCGCAAGCGCGGGCTGATCGATTCGCGCGCGGGCACGGGCACCTTCATCCGCTCGGGCAGCCCGAGCCTGCGGCTGCGCGGCGGCAGCGGCGCGGAGATGACGATGAACATGCCGCCCGAGCCCGACGACGAGCACCTGATGGCGCGGCTGCACGACAGCGCGAGCCGGGCCTTCGCGCAGGCCGACTTTCACGACCTGCTGCGCTACCAGGACTTCGGCGGCACCGCGCACGACCGTGCCGCCGCCATGCACTGGCTGCGGCCCTTCGTGCCCGATGCGAGCGTCGACCGCATCCTGGTGTGCCCCGGCATCCACGGCGTGCTCACCGCGCTGTTCTCGCAGCTGGCAAGGCCGGGCGAGCTGGTGTGCGTGGAGTCGCTCACGTACCCCGGCGTGAAGGCCATCGCGGCGCAGCTGGGCGTGCAGTTGCATGCGCTGCAGATGGACGACGACGGCCCCATCGCCGATGCCTTCGAACATGCCTGCAAGACGCTCAAGCCCAAGGCGCTGTACTGCAACCCCACGCTGCTGAATCCGACCTCCGCCACGGTGTCGCGCGCCCGGCGCGAGGCACTGGCGGACGTGGCGCTGCGCTACGCGGTGCCGATCATCGAGGACGACGCCTACGGCATGCTGCCGCGCCAGGTGCCCGCGTCGCTCGCCACGCTGGCGCCTGGGCTCACCTACTACGTGAGCGGATTTTCGAAATGCTTCGGTGCGGGGCTGCGCAGCGCGTACGTGTGCTCGCCGACGGTGGTGCAGTCGCAGCGGCTGGCCGGCGCCATGCGCGCGACCACGGTGATGGCATCACCCATCACCAATGCGCTGACCACGCTGTGGGTGGAGGACGGCACCACGGAAGAAATGCTGCAGGCGGTGCGCGCGGAGTCGATGGCGCGGCAGGTGCTGGCCACGCGCTATCTGGGCGCGAGCGGCCTGCAGGCGCATCCCGAGGGCTTTCATGCGTGGCTGCCGCTCACTCCGGGCTGGAGCCCGGTGGAGTTCGCGTCGTACCTGCGCACGCAGAACGTGGGCGTGGTCGCGAGCGCGGCCTTCTCTACCGACGGCGATCCGCCCGACGCGGTGCGCATCTGCCTGGGCGGGCCGATGTCGCGCGAGCAGTGCGATCAGGCGCTGCGGCTCATCGCGGACACGCTGGCGCATCCGCTGCATCCGCATGCCACGCTGCGCTGA
PROTEIN sequence
Length: 464
MTTITAHWRRQLRNSARPAYLQLAELIADDIKTGRLGVRDRLPTLRELANDLELNYTTVARGYAEARKRGLIDSRAGTGTFIRSGSPSLRLRGGSGAEMTMNMPPEPDDEHLMARLHDSASRAFAQADFHDLLRYQDFGGTAHDRAAAMHWLRPFVPDASVDRILVCPGIHGVLTALFSQLARPGELVCVESLTYPGVKAIAAQLGVQLHALQMDDDGPIADAFEHACKTLKPKALYCNPTLLNPTSATVSRARREALADVALRYAVPIIEDDAYGMLPRQVPASLATLAPGLTYYVSGFSKCFGAGLRSAYVCSPTVVQSQRLAGAMRATTVMASPITNALTTLWVEDGTTEEMLQAVRAESMARQVLATRYLGASGLQAHPEGFHAWLPLTPGWSPVEFASYLRTQNVGVVASAAFSTDGDPPDAVRICLGGPMSREQCDQALRLIADTLAHPLHPHATLR*