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SCNpilot_cont_300_bf_scaffold_174_curated_178

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(208505..209389)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036101C6 similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 294.0
  • Bit_score: 514
  • Evalue 5.90e-143
Variovorax paradoxus strain MEDvA23 contig_97, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ20579.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 295.0
  • Bit_score: 483
  • Evalue 2.70e-133
hypothetical protein; K08994 putative membrane protein similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 288.0
  • Bit_score: 452
  • Evalue 8.70e-125

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGCTCTTCGTGTGGCGCGGCTCGGTTCTGCCGGACATCGTTCCGCAGCTGTTGTGGACCACCGCCTTCGCGGTGCTGGTGACGGTGCTGCACGGGCGGCTCTTCCAATGGAAGGTGCCGCTCAACTTCGTGCCCTTCTCGCTCATCGGCCTCACGCTCGCCATCTTCCTGGGCTTCAGGAACAGCACGAGCTATTCGCGGTATTGGGAAGCCCGCACCCTGTGGGGCACCCTGCTCAACGAAACACGCTCGCTGGTGCGCCAGGCCCTGACGCTCGGCGACTCGCCGTCGCACGCCGGCACTGCGGCCGCGCGCCTCATCGCCTTCGTGCATGCACTGCGCCATCAGCTGCGCGGCACCGATCCTTCCGCCGATCTCGCCCGCCTGTTGCCACCCGAAGACTGCGAGCGCCTGCGCACGGCGCGCTTCAAGCCGGCCGTGCTGCTGCTCATGGTCGGCGAATGGCTGCGCGACCAGCGCAAGAGCGGCCGGCTCGACCCGATGCTCGCGCAGGCCATGGAAGTTCCGCTGGGGCGGCTGACGGAGGCGCTGGGCGGCTGCGAGCGCATCGCTGGCACGCCGATTCCCTTCACCTATTCCGTCATCATCCACCGCACGATTTATCTCTATTGCGTGCTGCTGCCCTTCGGCCTCGTCGATGCCATCGGCGCGATGACGCCGGTGGTGGTCGCGTTTATCGCGTACACCTTCTTCGCGCTCGAGGCGCTGGGCGCGGAGATCGAAGAGCCCTTCGGCACCCAGCCCAACGACCTGGCCCTGGACGCGATGTCCCGCATGATCGAATCCACCCTGCGCGAGATGATGGGCGAGCCTCGATCGCCGGAAAACACCGACGCGCGAACCGTTGGTTACATCCAAACCTGA
PROTEIN sequence
Length: 295
MLFVWRGSVLPDIVPQLLWTTAFAVLVTVLHGRLFQWKVPLNFVPFSLIGLTLAIFLGFRNSTSYSRYWEARTLWGTLLNETRSLVRQALTLGDSPSHAGTAAARLIAFVHALRHQLRGTDPSADLARLLPPEDCERLRTARFKPAVLLLMVGEWLRDQRKSGRLDPMLAQAMEVPLGRLTEALGGCERIAGTPIPFTYSVIIHRTIYLYCVLLPFGLVDAIGAMTPVVVAFIAYTFFALEALGAEIEEPFGTQPNDLALDAMSRMIESTLREMMGEPRSPENTDARTVGYIQT*