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SCNpilot_cont_300_bf_scaffold_817_curated_18

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 18319..19353

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00036CE91F similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 345.0
  • Bit_score: 345
  • Evalue 5.50e-92
Transcriptional regulator, CdaR {ECO:0000313|EMBL:AIJ26594.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 345.0
  • Bit_score: 345
  • Evalue 7.80e-92
beta-lactamase similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 302.0
  • Bit_score: 189
  • Evalue 2.10e-45

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGCAGGAACTGCTGGCTCGACTGAAGGCCCTTGACCCCAACGCCAGCCTGGCGTTGAGGATCATCGCGTGCTTCGACGAATTGGTTCGAGGTGGCGTCAACATCCAGGGGCTGCTCGGGGCAGCAGCCTCGCTCTCGGGCTGTGTAGCGGGGTTCGCCGGGCATCAATCAGAGCGCACGCTCCGCGTCGCACCGGACGGGCAGACCCTGAAGGGCAGCGCCGCAGCGCCGAGAGAAGGCTCCCTGGAAGCAAACGGCATGACCGTGTGGCTGGAGCGGCAGGGGCCAGCCCATGTGAACGATGCGATGGTCCTCGAGCGCCTCGCACTTGCGCTGGCCATCCGCAGCGGGCACCAGGCGGAAGATCCATTGCGTCGACTCGGCGATCTGCTCGACGTCAACGTTGACGTGGAGCATCGCCACGCTACGGCTGCCAAACTCGGATTGGCGCCGCACTTGAAGTACCGCGTTGCCACCTTGCCGCTCTTCGCGACATGGAAGCAACACCGCGACCTGCTGGAAGACGTCGTCAACACCCGCTACGGTCCGCTGCACGTGTGCTTACTGCGCGCCGAGGTGAAACACATCGACGCCAGCCCCTGCGGGATCGGGGTGGCGGCGGGGATCGACGACCTCCACCGATCGCTGGCGACAGCACTCGTGAGCTTGCGTCTGTGCGCTGTGCCCGATGTGCCCGTTGTCGTCGCAGACGACTATGGCGGTCTCATCGATCTGCTCGCCCAGTGCTCGGTCGATAGACCGTTGCTCGATGTCGAGGAACTCGAAGGCGTCATGCAGCATCCGTGGGCCGTGCGAACTCTGGATGCGCTGCTTCGCTCCGCGTCTATCCGTGACGCATCTCGCATTGCCGGTGTCCACCACAGCACGATGCAGGCGAGACTGGAGACCATTCGCGACTTGCTGTCGTTCGACCCACTCGACGGCATCGGCCGAACCCGCGTCGGCCTCGCCTTCCTCGCCTGGCGCGTTCGGCATTCGTCGGCGCTGGACCTGCCACCGCCCACCAGTCGCTAG
PROTEIN sequence
Length: 345
MQELLARLKALDPNASLALRIIACFDELVRGGVNIQGLLGAAASLSGCVAGFAGHQSERTLRVAPDGQTLKGSAAAPREGSLEANGMTVWLERQGPAHVNDAMVLERLALALAIRSGHQAEDPLRRLGDLLDVNVDVEHRHATAAKLGLAPHLKYRVATLPLFATWKQHRDLLEDVVNTRYGPLHVCLLRAEVKHIDASPCGIGVAAGIDDLHRSLATALVSLRLCAVPDVPVVVADDYGGLIDLLAQCSVDRPLLDVEELEGVMQHPWAVRTLDALLRSASIRDASRIAGVHHSTMQARLETIRDLLSFDPLDGIGRTRVGLAFLAWRVRHSSALDLPPPTSR*