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SCNpilot_cont_300_bf_scaffold_817_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_817_curated_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..306)
DNA (306bp) protein (102aa)
Cobyrinic acid ac-diamide synthase n=2 Tax=Ralstonia pickettii RepID=B2UA54_RALPJ
cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:EED68043.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
SCNpilot_cont_300_bf_scaffold_817_curated_2
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(557..1423)
DNA (867bp) protein (289aa)
RepA replication protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00035D78A4
RepA replication protein {ECO:0000313|EMBL:AKC78195.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
repA; replication initiation protein CMGI-3 (GI family Tn4371)
SCNpilot_cont_300_bf_scaffold_817_curated_3
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1450..1731)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WFA6_PSEAI
Putative dna binding protein {ECO:0000313|EMBL:ENO87665.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_817_curated_4
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1815..2567)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C049_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL21965.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_817_curated_5
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2903..3253)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C048_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL21964.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_817_curated_6
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3566..3859
DNA (294bp) protein (98aa)
Helix-turn-helix domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C046_9BURK
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EHL21962.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
helix-turn-helix domain-containing protein
SCNpilot_cont_300_bf_scaffold_817_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4240..4554)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=A9BR50_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX33108.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_300_bf_scaffold_817_curated_8
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5655..6200
DNA (546bp) protein (182aa)
Uncharacterized protein (Fragment) n=1 Tax=Plesiomonas shigelloides 302-73 RepID=R8AVY4_PLESH
Uncharacterized protein {ECO:0000313|EMBL:KJE37262.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actiniarum.;"
SCNpilot_cont_300_bf_scaffold_817_curated_9
unknown

Not on your lists

comp(6207..6848)
DNA (642bp) protein (214aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_817_curated_10
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7503..9530)
DNA (2028bp) protein (676aa)
ParB domain protein nuclease n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA05_ACISJ
ParB domain protein nuclease {ECO:0000313|EMBL:ABM43080.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
nuclease; K03497 chromosome partitioning protein, ParB family
SCNpilot_cont_300_bf_scaffold_817_curated_11
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9609..10433)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XAB6_DELAC
Uncharacterized protein {ECO:0000313|EMBL:AIJ46913.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_817_curated_12
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11271..11627)
DNA (357bp) protein (119aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=B2UA41_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EED68056.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
SCNpilot_cont_300_bf_scaffold_817_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12136..13296
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XAT0_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42367.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_817_curated_14

Not on your lists

comp(13339..14307)
DNA (969bp) protein (323aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2CVA7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD96990.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_300_bf_scaffold_817_curated_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14733..16265
DNA (1533bp) protein (511aa)
Integrase catalytic region n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D093_VARPS
Integrase catalytic region
Integrase catalytic region {ECO:0000313|EMBL:ACS22437.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_817_curated_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16268..17020
DNA (753bp) protein (251aa)
IstB domain protein ATP-binding protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D092_VARPS
IstB domain protein ATP-binding protein
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:ACS22436.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_817_curated_17
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17307..18311
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI0003768F99
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AIJ26593.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
alpha/beta hydrolase
SCNpilot_cont_300_bf_scaffold_817_curated_18
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18319..19353
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00036CE91F
Transcriptional regulator, CdaR {ECO:0000313|EMBL:AIJ26594.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
beta-lactamase
SCNpilot_cont_300_bf_scaffold_817_curated_19
Rhizobium sp. DS-S-51, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19555..20793
DNA (1239bp) protein (413aa)
4-chloro-3-hydroxybutyrate hydrolase n=1 Tax=Rhizobium sp. DS-S-51 RepID=B1B5J1_9RHIZ
4-chloro-3-hydroxybutyrate hydrolase {ECO:0000313|EMBL:BAG12296.1}; TaxID=475206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. DS-S-51.;"
beta-lactamase
SCNpilot_cont_300_bf_scaffold_817_curated_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21079..22527
DNA (1449bp) protein (483aa)
transposase n=1 Tax=Variovorax paradoxus RepID=UPI00036C86C3
Transposase {ECO:0000313|EMBL:EJL68523.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
transposase
Displaying 20 items

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