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SCNpilot_cont_300_bf_scaffold_343_curated_7

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(26098..26481)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003620920 similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 127.0
  • Bit_score: 194
  • Evalue 7.70e-47
roadblock/lc7 family protein; K07131 similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 127.0
  • Bit_score: 190
  • Evalue 2.70e-46
Roadblock/LC7 family protein {ECO:0000313|EMBL:ADU37205.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 127.0
  • Bit_score: 190
  • Evalue 1.20e-45

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGCAAATAACGCCAAGAATCAAGCTCGCCGCCGAATCCGCCATCGACACGCTGATGCGCGAGATCAAGGGCGTGAAAGCGGTGGTGATCTCGACCGAAGACGGCATGGAGCTGGCCGCGCGCGTGGAGAACACCGCGCAGGTGGCCCGCCTCTCGGCCATTGCCAGTTCGCTTGCGGCGCTGGGCGCCGTTGCGGGCGAGGAAAGCAACCTCGGCGCCTGCGACAACGTGACCATCGAAGCCACGCACGGCCACATCCTGATGCTGCAGGCGCGCCACCCGGAGATCGCGCTCATCGTGAGCGTCGTCACGGGCAAGGACGCCATCATCGGCCAGGTCCTCTACTTCGCGAAGCAGGCAACGCTGTCGCTGCAACAGGCCTGA
PROTEIN sequence
Length: 128
MQITPRIKLAAESAIDTLMREIKGVKAVVISTEDGMELAARVENTAQVARLSAIASSLAALGAVAGEESNLGACDNVTIEATHGHILMLQARHPEIALIVSVVTGKDAIIGQVLYFAKQATLSLQQA*