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SCNpilot_cont_300_bf_scaffold_343_curated_9

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(27031..27789)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037202D5 similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 250.0
  • Bit_score: 220
  • Evalue 2.60e-54
Variovorax paradoxus strain MEDvA23 contig_114, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ18486.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 260.0
  • Bit_score: 221
  • Evalue 1.20e-54
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 279.0
  • Bit_score: 218
  • Evalue 3.10e-54

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGACGACCGCCGCCAACCCCGCGACCAAAGGCCAACGCGCCTTGCTGAGCTTCAGCGTCGAGGGGTTGCCGCCCCGGGAAGAGCTGCTCCTCAAGTCACTGGTCCGCCTGCTGGACCACCGCACCCACCAGCACTGGGCCTGGAAGGCCGGGCAGGCCGACCTCCGGGTGGTGGGCGGGCAAGCCTCCACCGCAACCGATGACCCGGCGGCGGCCGTGCCGGTCCTGGCCATCGGCCAGCCCGACCCGCAGCGCGGCGGCCATTTCCTGCCGCTGCCGCTGCATGCGGACGAGCTGGAGCACACGCTCAACCGGCTCGGCGCATTGGTCGTCCACGCACGCGGCCTGGGCCTTGCGGCGTCCGACGGCCATATCGCCGAAAACGAAGAATTCCGCCTGCTGCGCTGGCCGCCCGCCGCCCTGCTCGAGACGCCTGCGCGCGTTCGACTGGCCACGCTGATGACCGGCCGGCCGACTTCCCTGCTGCTGCTGCGGCAACGCTCGGGCCTCGCGCCGCAGGACTGCCTCGACTTCCTCGCCGACCTGCGCCGTGCCGAGCTGCTCGAAAGCGCTCGCCAGCCCGCGCCCCCGGCCATCGCGGTCGGCGCGGCGCCGATCATGCTGTCCACGCCGTCCGCGCCCGATTCGGTACTGCCGGTCGACAGCCGCCCGCAGGCCCTGGCGCGCGACACCGTGCAACCCGGCCTGCTGGCACGCATCCGCAGCCGCCTCGGCCTGCTCGCCACCGGGCACAAATGA
PROTEIN sequence
Length: 253
MTTAANPATKGQRALLSFSVEGLPPREELLLKSLVRLLDHRTHQHWAWKAGQADLRVVGGQASTATDDPAAAVPVLAIGQPDPQRGGHFLPLPLHADELEHTLNRLGALVVHARGLGLAASDGHIAENEEFRLLRWPPAALLETPARVRLATLMTGRPTSLLLLRQRSGLAPQDCLDFLADLRRAELLESARQPAPPAIAVGAAPIMLSTPSAPDSVLPVDSRPQALARDTVQPGLLARIRSRLGLLATGHK*