ggKbase home page

SCNpilot_cont_300_bf_scaffold_24_curated_20

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(17027..18370)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EI16_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 35.9
  • Coverage: 359.0
  • Bit_score: 225
  • Evalue 1.40e-55
Uncharacterized protein {ECO:0000313|EMBL:KIC47211.1}; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-S4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 434.0
  • Bit_score: 317
  • Evalue 2.30e-83
periplasmic binding protein/LacI transcriptional regulator; K02058 simple sugar transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 29.6
  • Coverage: 335.0
  • Bit_score: 120
  • Evalue 1.50e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruegeria sp. ANG-S4 → Ruegeria → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1344
ATGCAAAGCCTCGAGCGCATCGCCAACCTGCTGTCCAGCTTCGGCAACGGACAGGCCGAGATCCCGCTGAACGAACTGCTCGCGCGCAACGGCATTCCGCAGTCCTCGGGCTACAAGCTGGTGAACGCGCTGGTGCACGAAGGCTTTCTGCAGCGGCCCGCGCGCGGCATGCTCGCGCCGGGGCCGGCGGCGGCGGCCTTCTTCTTCGCGCCGCTGAAGGCGCTGTCGCCGCCGGGCGACCCGAGCATTTCGGGCGGCGTGCGGCACTACCCCGACGCCAGCGGCCGGGGCATGCCGCGCATGGCGCAATGGAACCCCAACCTGCTCGACCTGGTGTCGACCGCGCGCTTCCGGCGCGAGCCGCCTTTCGTCATCGGCTTTGCCAACGCTTCGAGTTCCAGCCCGTGGCGCGTGGCGATGGCGCGCAGCCTGATGGCGGCGGCGCAGCGTCAGCGCGACGTGGTGTCGCGCGTGATGGTGCGCGACGCGCACGACGACCCGCGCCGCCAGATCGAGCAGCTCGCGGAGATGCGCGAGGAGCGCATGGACCTGTGCATCCTCAGCGCCGCCGCGAGCGACCACCCGGAGCTGCTAGCGGCCGTGCGCGGGCTGGGCGCCCAGGGCATTCCGGTGATCGGCGTGGACCGCATCTGCGGCGAGCCGGAAGACATGGTCTCCTTCGTCACCGCGTCCGACGTGCTGGTCGGGCGCATGAGCGCGCTGTGGCTGGTGGAGTACCTGGGCGGGCGCGGCCGCATCCTCATGCTGTGCGGCCGCGAAGACGCGAGCCCCTGCCGGCTGCGGCTGCAGGCCGCGATGGAAATACTCGGGCTGCACCCGAAGATCGAAGTGGTGGCCATCGAGTTCACCAACTGGGAGGCCAGCCTGGGCCACGAGATCGTGCAGCGCCACCTGGCGGCCGGCACCAAATTCGACGGCGTGTGGTGCGACTCCGGCCTGCAGGGCGTGGGCTCGCTGCGCGCCTTCACCGAGGCCGGCTACAAGCGCGGCACGATTCCGCCGCACACCGGGGGCGAGGTCAACCTCATGTACAAGCTCGCCTTCCATCACAAGATTCCGCTGTGCGGCGTCGACTACCCGGCGGCCATGGGCGCGCTGAGCTTCCAGACCGCGCTCGACACCCTCTTCGGCCGCCAGGTGCCGCGCCGCGTGGAGGCCAACCTGGAGATCGTCATCTCGCGCGGTCACGAGACCGCGTCGGTCAAGGCCGACCTCTTCGCCGAGGAAAAGGTGCGCTGGGACCGCGAGGACGAATACGTGCACGCCTCGGGCTGGATTCCCAGCAGCACCACGTCGCACGGGCGCAAGCCCTTCTTCGTATGA
PROTEIN sequence
Length: 448
MQSLERIANLLSSFGNGQAEIPLNELLARNGIPQSSGYKLVNALVHEGFLQRPARGMLAPGPAAAAFFFAPLKALSPPGDPSISGGVRHYPDASGRGMPRMAQWNPNLLDLVSTARFRREPPFVIGFANASSSSPWRVAMARSLMAAAQRQRDVVSRVMVRDAHDDPRRQIEQLAEMREERMDLCILSAAASDHPELLAAVRGLGAQGIPVIGVDRICGEPEDMVSFVTASDVLVGRMSALWLVEYLGGRGRILMLCGREDASPCRLRLQAAMEILGLHPKIEVVAIEFTNWEASLGHEIVQRHLAAGTKFDGVWCDSGLQGVGSLRAFTEAGYKRGTIPPHTGGEVNLMYKLAFHHKIPLCGVDYPAAMGALSFQTALDTLFGRQVPRRVEANLEIVISRGHETASVKADLFAEEKVRWDREDEYVHASGWIPSSTTSHGRKPFFV*