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SCNpilot_cont_300_bf_scaffold_24_curated_25

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 23539..24699

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter, periplasmic solute-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CF39_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 377.0
  • Bit_score: 460
  • Evalue 1.70e-126
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM31455.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 370.0
  • Bit_score: 511
  • Evalue 9.20e-142
substrate-binding component of ABC transporter similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 364.0
  • Bit_score: 428
  • Evalue 2.30e-117

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1161
ATGAAATCACATCGTTCAAACCGCCGGCAGGCCTTGCGCTGCGGCGTCCTCGCACTCGCCGTGGCCGCCCACGCGGGCGCCTTCGCGCAGGTCGCCAACGTCGACGTCGACAAGGAAATGCAGGAGCAAGCGCGCCTCATGACCGCCACGCCCGAGGGGCCGGCCGGCCAGCCCTGGCTGCAGCGCATCGGCGGCAAGACCGTCGACACCGCCAAGTACAGGAAGAAGGGCCCCTACACGCTGTGTTTCTCGAACGCGAGCGTGGGCAACCCGTGGCGCGTGGTCGGCTGGAACACCATGCAGGCCGAGGTCGAGCTGAACAAGGCCGACATCAAGGGCTTCGAATACGCCGACGCGCAGGGCAAGGACGAGAAGCAGATCTCCGACATCCGCTCGCTCGTGAACAGCGGCAAGTGCGACGCGCTGATCGTCTCGCCCAACACCTCGGCCGCGCTCACGCCCGCGGTGGAAGAAGCGTGCAAGAAGCTGCCCGTGGTGACTTTCGACCGCTCGGTGGACAGCCTGTGCCCGGTGACGGCGGTGCGCTCCATCGGCGGCTATGCCTGGGGCAAGGTCGGCGCCGACTTCATCGCGGCCAACGCGCCCAAGGGCGGCAAGGTGCTGGTGCTGCGCACCGCGCCGGGCGTGGACCTGTTCGAGACGCGCTGGGCCGCCGCCAAGAAGGTGTTCGACGCATCGGGCCTGAAGGTGGTGGGCAACGAGTTCGTGGGCGGCGACCGCGCCAAGACCAAGGCCACGGTGGCCGACTACCTCAGCCGCAGCGGCAAGATCGACGCGGTGTGGGTCGACCTGGGGGCGGTGTCGGTGGCCGTGGCCGAGGCCTTCGAGGACGCGGGCCAGCCTTACCCCATCATCACCGGCGAAGACCAGCAGGACTACCTGCAGGCCTGGAAGAAGAACGGCTTCAAGGGCATCGCGCCCACGTACCCGGCCTACCAGTGGCGCACGGCCGTGATCGCCGCGCTCAAGGCGTTGAAAGGCGAGCCGCTGCCGTCGCCGACGTGGATCCTGCCGCAGCCGAGCATCACCGCCAAGGAACTGCCGCAGTACGTGAACGACAAGCTGCCGCCGCTGCACTATTCGATGTGCGGTTGCGAGAAGATGCCGGGCTACCCGCAGCGCTGGGGCGGCAAGCAGTAA
PROTEIN sequence
Length: 387
MKSHRSNRRQALRCGVLALAVAAHAGAFAQVANVDVDKEMQEQARLMTATPEGPAGQPWLQRIGGKTVDTAKYRKKGPYTLCFSNASVGNPWRVVGWNTMQAEVELNKADIKGFEYADAQGKDEKQISDIRSLVNSGKCDALIVSPNTSAALTPAVEEACKKLPVVTFDRSVDSLCPVTAVRSIGGYAWGKVGADFIAANAPKGGKVLVLRTAPGVDLFETRWAAAKKVFDASGLKVVGNEFVGGDRAKTKATVADYLSRSGKIDAVWVDLGAVSVAVAEAFEDAGQPYPIITGEDQQDYLQAWKKNGFKGIAPTYPAYQWRTAVIAALKALKGEPLPSPTWILPQPSITAKELPQYVNDKLPPLHYSMCGCEKMPGYPQRWGGKQ*