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SCNpilot_cont_300_bf_scaffold_24_curated_27

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(26419..27846)

Top 3 Functional Annotations

Value Algorithm Source
GTP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000378094C similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 469.0
  • Bit_score: 818
  • Evalue 3.10e-234
GTP-binding protein hsr1-like protein similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 466.0
  • Bit_score: 817
  • Evalue 2.80e-234
GTP-binding protein HSR1-related protein {ECO:0000313|EMBL:ADU36626.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 466.0
  • Bit_score: 817
  • Evalue 1.30e-233

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1428
ATGACGCAGCAACAACAACAACAGCAACCCGTCCGCATCGCGGTCGTCGGCCACACCAACGCGGGCAAGACCTCGCTGCTGCGCACGCTCACGCGACGCGTCGACTTCGGCGAGGTGTCGCAGCGCCCTGGCACCACGCGCCATGTCGAGTCGGTCGACCTCGAGGTCGAAGACGAAACCGCCGTGCGCTTCTTCGACACGCCGGGCCTCGAAGATGCCGTCGCATTGCGCGAGCACCTCGCCCGCTTCGACCCGCAGGCCACGCCGCCCGAGCGCATCCGCCAGTTCCTGCAAGGCCCGGAGGCGCACGGCGTGTTCGAGCAGGAGGCCAAGGTGCTGCGCACCATGCTCGACATCGACGCAGCCTTCCTCGTCATCGACGTGCGCGAGCCGGTGCTGCCCAAGTTTCGCGACGAGATCGAACTGCTCAACGCCTGCGCGCGCCCCGTGCTGCCGGTGCTGAACTTCGTGCGCGATGCCGCGAGCCGCGAGCCGGCATGGAAAGAGCTTCTGTCGGCCTACGGCCTGCATGTGCAGGTGCGCTTCGACGCGGCGGCGCCGTTCGTCGGCGCCGAGCAAGACCTGTACAACGACCTCGCCACCCTGCTGCGCGACCGCCGCGAACTGCTGCGCGGCGTGGTCGACTCGCTGGAAACCGAAGCCGCCGGCCGCCGCCGCTCGGCCTGCACGCGCATCGCCGCGCTGCTGGTCGATGCCGCCTCGGTGCGCCGCACGGTGCAGGCGGCCGAATTCGCCGATGCCGGGCGACGGCAGACGCTGGTCGCGGCGCTGCGGAAGACCGTGTTCGACAAGGCCCAGCACTGCACCGACGACCTGCTCGCGCTCTACGGCTTTCGCCAGGGCGACGCCGACGAAGCGCCGCTGCCGATCATCGAAGGCCGCTGGACGCTCGACTTCTTCAGCCCCGAGGCCATGAAGGACGCGGGCCTGCGCCTGGGCAAGGGCGCGGTCATCGGCGCCGCGGTGGGCGTGGTGGCCGACCTGGCCGTGGCCGGCATCTCGCTCGGCGCGGGCGCGGCCCTGGGCGGCGCCATCGGCGGCGCGGTGTCGCAGGGCTGGGGGCCGCTGGGCCGCAAGCTCGCCAACAAGCTGCGCGACGTGCATGAACTGACTGTCGAAGACGGCGTGCTGTTCGCGCTGGTCGCATGGCAGCTCAAGCTCACGCAGGCACTGGAAGTGCGCGGCCATGCCGCCACGCAGCGCATCGCGGCCGAGGCGCCCGCCGACGGCGATGCCCCGACCCGTGCTGCCGCAGCGGCAGTGCGCGCCGCGCAGCCCGCGCGCAACCACCCGGAGTGGGAGGCGAGCGGCGTGACCACGCGCGCCTTCTGGCGCCCGTCGCCGCAACGCGAGGCGCTCGTTGCCGAGCTGTCTGAGCTGCTGCTGCAGGCATTCGAAGAGGCCTGA
PROTEIN sequence
Length: 476
MTQQQQQQQPVRIAVVGHTNAGKTSLLRTLTRRVDFGEVSQRPGTTRHVESVDLEVEDETAVRFFDTPGLEDAVALREHLARFDPQATPPERIRQFLQGPEAHGVFEQEAKVLRTMLDIDAAFLVIDVREPVLPKFRDEIELLNACARPVLPVLNFVRDAASREPAWKELLSAYGLHVQVRFDAAAPFVGAEQDLYNDLATLLRDRRELLRGVVDSLETEAAGRRRSACTRIAALLVDAASVRRTVQAAEFADAGRRQTLVAALRKTVFDKAQHCTDDLLALYGFRQGDADEAPLPIIEGRWTLDFFSPEAMKDAGLRLGKGAVIGAAVGVVADLAVAGISLGAGAALGGAIGGAVSQGWGPLGRKLANKLRDVHELTVEDGVLFALVAWQLKLTQALEVRGHAATQRIAAEAPADGDAPTRAAAAAVRAAQPARNHPEWEASGVTTRAFWRPSPQREALVAELSELLLQAFEEA*