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SCNpilot_cont_300_bf_scaffold_130_curated_10

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(9288..10052)

Top 3 Functional Annotations

Value Algorithm Source
UPF0271 protein PMI12_00649 n=1 Tax=Variovorax sp. CF313 RepID=J3CW68_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 253.0
  • Bit_score: 475
  • Evalue 4.50e-131
UPF0271 protein PMI12_00649 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 253.0
  • Bit_score: 475
  • Evalue 6.30e-131
LamB/YcsF family protein similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 253.0
  • Bit_score: 456
  • Evalue 5.20e-126

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGGACATCGACCTGAACGCAGACCTCGGTGAAGGCTTCGGCCCCTGGCGCATGGGCGAGGACGAAGCCCTGCTCGACATCGTCTCTTCCGCCAATGTCGCCTGCGGCTTCCACGCCGGCGATCCGGTCATCATGGACCGCACCGTTCGCATGGCGCGCCAGCGCGGCGTCGATGTCGGCGCGCACGTGGGCTTTCCCGACCTGATGGGCTTCGGCCGCCGGCAGATGCAGATCGAGACAAAAGAACTGGTCTCTTACGTGCTCTACCAGCTCAGCGCGCTCGCCGGCATGGCGCGCACGGCAGGCCACCGCATGACGCACATGAGCTTCCACGGCGCGCTCGGCAACATGGCCGCGGCCGACGCCGCGCTGGCCGAGCCGCTGGTGCGCGCCGTGGCCGACTTCGACCCCTCGCTCACCGTCAGCACCTCCGCCAGCCGCGCCATCGAAGGCGCCGCCGAGCGCTGCGGCCTGCGCGTGCGCACCACCTTCCTGGCCGACCGCGCCTGCGGCGACGACGGCCTGCTCGTGCCTCGCAAGCTGCCCGGCGCCGTGATCCACGAGCGCGAGGCGGTGCTGGCGCGCGTGCGCCAGCTTCTGGAGGACGGCACCGTCACCAGCAGCACCGGCAAGAAGATCCCGATGCGCGTGCATTCGATCCTGCTGCACGGCGACACGCCCGGCGCCGTCGAGCTGGCCCGCGCCGTGCGTGGCGTGGTCGAGCAGGCGGGGCGCATCGTGCCCATCTCCAGGCAATCGAACTGA
PROTEIN sequence
Length: 255
MDIDLNADLGEGFGPWRMGEDEALLDIVSSANVACGFHAGDPVIMDRTVRMARQRGVDVGAHVGFPDLMGFGRRQMQIETKELVSYVLYQLSALAGMARTAGHRMTHMSFHGALGNMAAADAALAEPLVRAVADFDPSLTVSTSASRAIEGAAERCGLRVRTTFLADRACGDDGLLVPRKLPGAVIHEREAVLARVRQLLEDGTVTSSTGKKIPMRVHSILLHGDTPGAVELARAVRGVVEQAGRIVPISRQSN*