ggKbase home page

SCNpilot_cont_300_bf_scaffold_130_curated_16

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(14158..15129)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2KGZ0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 323.0
  • Bit_score: 611
  • Evalue 6.60e-172
Transcriptional regulator {ECO:0000313|EMBL:EJL79465.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 323.0
  • Bit_score: 611
  • Evalue 9.30e-172
nitrogen assimilation transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 323.0
  • Bit_score: 602
  • Evalue 5.70e-170

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGCTAGGCTTGGCTTTTGCTTGGGGACAAGGCGTGAACCTGCGACGCCTCAAATATTTCGTGAAGATCGTGGACATCGGCAGCCTGACGCAGGCGGCCGAGGTTCTTTTCATTGCCCAACCTGCGCTGAGCCAGCAACTGGCCACGCTCGAGGGCGAGGTGCGCCAGCAATTGCTCGTGCGCACCAAGCGCGGCGTGACGCCCACCGAGGCCGGCAAGGTGCTCTACCGCCATGCGCAGATCATCCTGCGCCAGTGCGAGCAGGCCCGCGTCGACATGGAAGCCGCCGGCGAAGGCCTCTCTGGCCAGGTGTCGGTGGGGCTTGCGCCCGGCACGGCCGCCTCGGCGCTGTCGCTGCCGCTGCTGCGCACCGTGCGCGCGCGGCATCCGGGCATCCTGCTCTACCTGAACGAGAACTACGGCACCACGCTCAGCGAGCTCATCATGAACGGCCGCATGGACCTGGCCGTGCTGTACGGCGACAAGGCCATCCACGGACTCACGTTCCTGCCGCTGCTCAAGGAGCCGCTGTTCCTGGTCGGCCCGGCGTCGATGCCGGCGCCTTCGCAGCCGGTGAAGCTGGCCGACCTGCGCGACATCGAACTCTTCCTGCCGCGCCCCTACAACGTGGTGCGCAAGCTGGTCGACGCCGCCTTCGTGCGCGCGGGCATGGTGCCGCGCGTGGTGGCGGAGATCGAATCGGCCTTCACCCTCACGGCGGCCATTGCCGACGGGCTGGGCGCCACCATCCTGCCGGCGTCGATGGCGCGCGAAGTGGTCGCGACCTGCGGCGCCTGGCAATTCCCCATCGTCGACCCGGTCATCGAGGCGCCGCTGGCGCTGTGCCAGTCCGACCACCTGCCGCTCTCGGAGCCCGCGCAGGCGGTGAAGGACATCCTGCTCGAGCTGGTGGTGGACCTCGCGGGCACCGTGGCGTCGACGCCCGAGCCGGAGCTCTCCGCACTGTCATAA
PROTEIN sequence
Length: 324
MLGLAFAWGQGVNLRRLKYFVKIVDIGSLTQAAEVLFIAQPALSQQLATLEGEVRQQLLVRTKRGVTPTEAGKVLYRHAQIILRQCEQARVDMEAAGEGLSGQVSVGLAPGTAASALSLPLLRTVRARHPGILLYLNENYGTTLSELIMNGRMDLAVLYGDKAIHGLTFLPLLKEPLFLVGPASMPAPSQPVKLADLRDIELFLPRPYNVVRKLVDAAFVRAGMVPRVVAEIESAFTLTAAIADGLGATILPASMAREVVATCGAWQFPIVDPVIEAPLALCQSDHLPLSEPAQAVKDILLELVVDLAGTVASTPEPELSALS*