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SCNpilot_cont_300_bf_scaffold_130_curated_22

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 20155..20865

Top 3 Functional Annotations

Value Algorithm Source
3-oxoacyl-ACP reductase n=1 Tax=Variovorax paradoxus RepID=UPI00037AD3A8 similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 235.0
  • Bit_score: 414
  • Evalue 8.70e-113
short-chain dehydrogenase/reductase sdr similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 243.0
  • Bit_score: 399
  • Evalue 5.40e-109
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADU36015.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 243.0
  • Bit_score: 399
  • Evalue 2.40e-108

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGTCGAATGAAGCCGCGACAGCGCCGCATGCGGTGGTGACGGGCAGCAGCGGCGGCATCGGCCGGGCCATTGCGTCGCAGCTGCTCGAAGCGGGCTGGCGCGTGAGCGGCATCGACCTCGCGGCGCCGACGCTGTCTTCCCACGCCGGCTTCACCCACACGGCGGTGGACCTTTGCAACGCCGATGCCATCGCGCGCGCCGCGGCCACCCTGCAGGATGCCGATGCGCTGGTGCATGCGGCCGGCGTGCTGCGCGTCGGCCCGCTGGGCGCGCTCGACCACGCGGGCGGCGAACTCATGTGGCGGCTGCACGTGGATGCGGCCGCGCGGCTGGCCGATGCGCTCGTGCCCGCGATGGCCGCGCGCGGCCAGGGCCGCGTGGTGTTCGTCGGCAGCCGCGTCGCGCAGGGCCTGCCAGGCCGCGGCCAATACGCCGCGACCAAGGCCGCGCTCATCGCGCTCGCGCGAAGCTGGGCGGCGGAGGTGGCGCCGCAGGGCGTGACCGTCAACGTGGTGTCGCCCGGCGCGACGCAGACCTCGATGCTGCAAGACCCCGCACGCGCGGGCAGCGCGCCGCGCATGCCGCCCATCGGCCGGCTGATACGGCCGGAGGAGATCGCGGCGCTCGTGGGTTTTCTTCTTTCGCCGCAGGCGGCGGCCATCACGGGGCAGGACCTTGCCATCTGCGGCGGCTCGTCGCTGCACCGCTGA
PROTEIN sequence
Length: 237
MSNEAATAPHAVVTGSSGGIGRAIASQLLEAGWRVSGIDLAAPTLSSHAGFTHTAVDLCNADAIARAAATLQDADALVHAAGVLRVGPLGALDHAGGELMWRLHVDAAARLADALVPAMAARGQGRVVFVGSRVAQGLPGRGQYAATKAALIALARSWAAEVAPQGVTVNVVSPGATQTSMLQDPARAGSAPRMPPIGRLIRPEEIAALVGFLLSPQAAAITGQDLAICGGSSLHR*