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SCNpilot_cont_300_bf_scaffold_22_curated_26

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 32578..33273

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI0003639F4E similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 232.0
  • Bit_score: 420
  • Evalue 1.20e-114
FtsH-interacting integral membrane protein {ECO:0000313|EMBL:EJL80169.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 233.0
  • Bit_score: 411
  • Evalue 1.00e-111
hypothetical protein; K06890 similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 232.0
  • Bit_score: 400
  • Evalue 3.10e-109

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGAACAACAGCTCTCCCGTCTACGCCAGCCTCGACCTGCCGCTGGCCTCCCCCCAGGAACGCAACCGCGTCCTGCGCAACACCTATTGGCTGCTCGCGCTGTCGATGGTGCCCACCGTGCTCGGCGCCTGGATCGGCGTTTCCACCGGTTTCTCGCGCGCGATGTCGCCGGGCATCGGCCTGATGGTGTTCCTCGGCGGCGCCTTCGGCTTCATGTACGCCATCGAGAAAACCAAGGAATCGGCCGCCGGCGTGCCGGTGCTGCTGGCCTTCACCTTCTTCATGGGCCTGATGCTGTCGCGCCTGGTCGGCACGGTGCTCGGCCTGCAGAACGGCGCCAGCCTGGTCATGACGGCCTTTGCCGGCACCGGCGCGATCTTCCTGGGCATGGCGACGCTGTCGTCGGTCATCAAGCGCGACCTGTCGGGCATGGGCAAGTGGCTCTTCATCGGCGCCATCCTGCTGCTGGTGGCGGGCATCGCCAACTTCTTCCTGAAGTCGAGCGCGCTGATGATGACGCTGTCGGTGCTGGCCATCGGCATCTTCTCGGCCTTCATCCTGCACGACCTCAAGCGTGTGAAGGACGGCCTGGAGACCAACTACATCTCCGCCACGCTGGGCGTGTACCTCAGCATCTACAACGTGTTCCAGTCGCTGCTGGCCCTTCTGGGCATTGCCGGCGGCCGGGACGAGTAA
PROTEIN sequence
Length: 232
MNNSSPVYASLDLPLASPQERNRVLRNTYWLLALSMVPTVLGAWIGVSTGFSRAMSPGIGLMVFLGGAFGFMYAIEKTKESAAGVPVLLAFTFFMGLMLSRLVGTVLGLQNGASLVMTAFAGTGAIFLGMATLSSVIKRDLSGMGKWLFIGAILLLVAGIANFFLKSSALMMTLSVLAIGIFSAFILHDLKRVKDGLETNYISATLGVYLSIYNVFQSLLALLGIAGGRDE*