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SCNpilot_cont_300_bf_scaffold_22_curated_43

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(52085..52708)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003604516 similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 209.0
  • Bit_score: 322
  • Evalue 3.00e-85
MarR family transcriptional regulator {ECO:0000313|EMBL:KGD92415.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 167.0
  • Bit_score: 215
  • Evalue 9.60e-53
pecS; MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 180.0
  • Bit_score: 197
  • Evalue 4.60e-48

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Taxonomy

Achromobacter sp. RTa → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGCCGCACAAAAAAGAAGCATCGAACCGACGTCCGCCCCAAGGCGATGCCAAGGAGCGCGAGGTACTCGACGAGGCCCCGGCCGAAGGCGGAGACCTGGTCGAGCGCGGCATCCGCCAGTGGCTGCGCGAGCGGCCCGACATCGACAGCAGTGGCAAGTCGGTGGTCGGGCGCCTGCTGCGGCTCGAGGAAGTCGTGCTGCGCACCCTGAACCAGGTGCTGGAGCCCTTCGGCATGAAGTATCAGGAGTACGCCGTGCTCGCCACTCTGCGCGTGGCGGGGGCGCCCTACCGCCTCTCGCCGTCGCGGCTGCAGAGCACGCTGCTCTTCACGTCGGGCGGGCTGTCGAACCTGCTCAAGCGGCTCGAGAAGGAGGGCTGGATCAAGCGCTCCATCGACCCCAACGACGGGCGCGGCGTGCTGGTCAAGCTCACGGCCAAGGGCATCCGGCTGGCCGACGAGGCCATGCCCCGGCACGCGGCGGCGGAACTGCATCTGCTGCGCATGTTCGATGCCTCGCAGCGCGAGGTGCTGTCGGGCCTGCTGAGCCAGATGATGACCGGCAACGCACCCGAACTGGGGCCGGAGCCTGGAGAGGCGCTGCTGCGCAAGCCGCGCGATTGA
PROTEIN sequence
Length: 208
MPHKKEASNRRPPQGDAKEREVLDEAPAEGGDLVERGIRQWLRERPDIDSSGKSVVGRLLRLEEVVLRTLNQVLEPFGMKYQEYAVLATLRVAGAPYRLSPSRLQSTLLFTSGGLSNLLKRLEKEGWIKRSIDPNDGRGVLVKLTAKGIRLADEAMPRHAAAELHLLRMFDASQREVLSGLLSQMMTGNAPELGPEPGEALLRKPRD*