ggKbase home page

SCNpilot_cont_300_bf_scaffold_22_curated_49

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 57522..58283

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase {ECO:0000313|EMBL:KGD92421.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 248.0
  • Bit_score: 307
  • Evalue 1.30e-80
Short-chain dehydrogenase/reductase SDR id=4897960 bin=GWC2_Methylomirabilis_70_16 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 248.0
  • Bit_score: 274
  • Evalue 8.90e-71
bacC; short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 254.0
  • Bit_score: 254
  • Evalue 3.00e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Achromobacter sp. RTa → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGACCGGCGCGGCTTCTACCGGCTTGCGCTTCGTCGTGAGCGGCGGCGCCAGCGGCATCGGCCTTTCGGTGGCGCGGCTGGCGGTGCAGCGCGGCGCGCGCGTGGCGCTGCTCGACCTCGACCAAGCCGGCCTGGCCGCCGCCTGCGCGGCGCTGGGCGACGCCGCCCTGCCGCTGCCCTGCGACGTGGCCGACCCGCACGCGGTGCGGGCGGCGGTCGACGCCGCCGCCCACTGGCTCGGCGGTGTCGACGCGCTGGTGAACTCGGCCGGCATCGATTCGCTCAAGCCGCTGGAGCAGACCGGCGACAACGAATGGGCGCGCATGCTGGCCGTCAACCTCACCGGGCCGATGCTGCTGTGCCGCGCGGCCATGCCGCACCTGCGCGCGGCCGGCGGCGGCAGCATCGTCAACATCTCGTCGGGCGCGGGCCTGCGCCCGTTGCCCAACCGCACCGCCTACTGCGCCACCAAGGCGGCGGTCATCATGTTCGGCAAGGCGCTGTCCATCGAGGCCGCGGCCGACGGCATCCGCGTCAACGCGGTCTGCCCCGGCGCCATCGACACGCCCCTGTTCCGCACCAGCTACGAGAACAGCGACGACCCCGAGCGCACGCTGGAGGAAATCCGCCAGCGCTACGCCCTGGGCCGCGTCGCCGCGCCCGAGGAAGTGGCCGAGGCCGTGCTCTACCTGAGCGGCCCGGGCGCGAGCTACATCACCGGCACCGCGCTCGCCGTCGACGGCGGGCGCACCTTCCACTGA
PROTEIN sequence
Length: 254
MTGAASTGLRFVVSGGASGIGLSVARLAVQRGARVALLDLDQAGLAAACAALGDAALPLPCDVADPHAVRAAVDAAAHWLGGVDALVNSAGIDSLKPLEQTGDNEWARMLAVNLTGPMLLCRAAMPHLRAAGGGSIVNISSGAGLRPLPNRTAYCATKAAVIMFGKALSIEAAADGIRVNAVCPGAIDTPLFRTSYENSDDPERTLEEIRQRYALGRVAAPEEVAEAVLYLSGPGASYITGTALAVDGGRTFH*