ggKbase home page

SCNpilot_cont_300_bf_scaffold_22_curated_51

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 59076..60452

Top 3 Functional Annotations

Value Algorithm Source
glutamyl-tRNA amidotransferase subunit A n=1 Tax=Variovorax paradoxus RepID=UPI000371D75C similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 457.0
  • Bit_score: 818
  • Evalue 3.00e-234
Amidase {ECO:0000313|EMBL:KGD92423.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 457.0
  • Bit_score: 622
  • Evalue 5.70e-175
Putative amidase similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 461.0
  • Bit_score: 582
  • Evalue 1.50e-163

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Achromobacter sp. RTa → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1377
ATGGACCTGATGGACCACAGCGCGACCGAACTCGCCGCGCTGATCCGCGACAGGAAGGCCTCGCCCGTCGAGGCGGTGCAGGCTGCGCTCTCGCGCATCGAGGCGCGCCGCGAACTCAACGCCTTCATCACCGTGACCGGCGAGCAGGCGCTCGATGCCGCGCGCCGCGCCGAAGCCGCGGTGATGGCCGGCGAAGCGCTCGGCCCCTTGCATGGCGTGCCCTACTCGGTGAAAGACCTCACGCTGACGGCCGGCGTGCGCACCACCATGGGCTCGGCCATCTACGAAGACTTCGTGCCCGAGGAAGACGCGGTGGCGGTGGCGCGCGCCAAGGCCGCCGGCGCCATCCTCATCGGCAAGACCACCACGCCCGAGTTCGGCCACAAGCAGGTGGCCACCGCGCCCATCTTCGGCCGCACGCTGAACCCGATCGACGCGCGCTACACGCCCGGCGCATCGAGCAGCGGCGCGGCTGTGGCCGTGGCGGCGGGGCTGGGTTCGCTGGCGCTGGGCACCGACGGCGGCGGCTCGATCCGCATTCCGGCGTCGTGCTGCGGCATCGTCGGGCTCAAGGCCACGCTGGGCGTGGTACCCAACCTGCAGGCGCCCGACCTGTACTCCGCCAACTCCTTCACCGGGCCGATGGCGCGCGACGTGGCCGACACGCAGTTGCTGTTCGACGCCATCAAGGGCTTCGATGCGCGCGACCCGTACGGGCTGTGCGGGCCGATGCCCCGTCGCGCCAGGCCCGCCTCGCTGCGCGGCCTGCGCGTGGCCTGGCTGCCCACCGCCGGCAACCCTGTCGACCCCGAAGTCGAGGCCGTGACCACCGCCGCCGTGAAAGCGATGGAGCGCGAAGGCGCGGTCGTCGAAACCGTGATGCTCGACTTCGTCTCGCTGGAGCGTCACTTCCTCGTAGTGCTGCAGTCGATGCTCGCCGCGCGCGTGGGCGCCAACCTCGAACGCTTCGGCGACCGGCTCGACGCGACGCTGATCGACGCGGTGCGCAAGGGCCGCCAGCACAGCGCCGTCGACCTGCACGAGGCCACCTTCGCCAAGACCCGCTGCTTCACCGAGCTGCAGGCGCTGTTCGGGCGCTTCGACGTGCTGGTGTCGCCCACCGTCTCCGCGCCGCCGCTGCCCATCGACATGGACGTGAGCGGCGAGGTCGAGATCGGCGGCAAGCCCGCCGGCACCATCCGCGGCGCCTGGTATCCGTACACCTATCCGATGAACCTCACCGGCCATCCCGCGCTGTCGATGCCCTGCGGCAAGAGCACGAACGGCCTGCCCATCGGGCTTCAGCTCGCGGGCCGCTGGTACGACGACGACTACCTGCTGGCCATCGCAGGCCTGGTCGAGCAGGCGCTCGGCTGA
PROTEIN sequence
Length: 459
MDLMDHSATELAALIRDRKASPVEAVQAALSRIEARRELNAFITVTGEQALDAARRAEAAVMAGEALGPLHGVPYSVKDLTLTAGVRTTMGSAIYEDFVPEEDAVAVARAKAAGAILIGKTTTPEFGHKQVATAPIFGRTLNPIDARYTPGASSSGAAVAVAAGLGSLALGTDGGGSIRIPASCCGIVGLKATLGVVPNLQAPDLYSANSFTGPMARDVADTQLLFDAIKGFDARDPYGLCGPMPRRARPASLRGLRVAWLPTAGNPVDPEVEAVTTAAVKAMEREGAVVETVMLDFVSLERHFLVVLQSMLAARVGANLERFGDRLDATLIDAVRKGRQHSAVDLHEATFAKTRCFTELQALFGRFDVLVSPTVSAPPLPIDMDVSGEVEIGGKPAGTIRGAWYPYTYPMNLTGHPALSMPCGKSTNGLPIGLQLAGRWYDDDYLLAIAGLVEQALG*