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SCNpilot_cont_300_bf_scaffold_22_curated_54

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(62936..63847)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000377FA04 similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 299.0
  • Bit_score: 429
  • Evalue 3.40e-117
Bacterial regulatory helix-turn-helix, lysR family protein {ECO:0000313|EMBL:AJZ58695.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 296.0
  • Bit_score: 431
  • Evalue 9.50e-118
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 296.0
  • Bit_score: 428
  • Evalue 1.40e-117

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Taxonomy

Burkholderia fungorum → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGAAGATCGACATCCTCGGTATCCAGGCTTTCGTGGCCATTGCCGACGAAGGCAGCTTCCAGGCAGCGGCCGGCGCGCTCAATGTCACGCAGACCGCCATCACGCAGCGGCTGCGCAAGCTGGAAGAGTTTCTGGGCGTGGCGCTGGTGGAGCGCACAACGCGCTCGGTGGCACTCACCACCATCGGCCGCGACTTCGTGCCGCGCGCGCGACGCCTGCTGGTGGAGCTGGCCGATTCACTGCTCGAGATCCGCGAGACCGGCAAGGCGGAGCGCGGCGACGTGTCGATCGCCTGCGTGCCCACGGCGGGCGTGCAGTTCCTGCCGCGCATCATGAAGGCCTATTCGGCCAAACATCCGCACAACCGCATCAAGATCCTCGATCACTCGTCGGCGGCCGTGGCGAATGCGGTGCTGCACCGCGAGGTGGAGTTCGGCATCGGCATGGTGGGCGCGCATTCGCCGGAGCTGCAGAGCGTGCCGCTGATCGAAGACGAGTACGTGCTCATCTGCCACGAGGCGCATCCGCTGGCGCAACGCAAGCGCATCGCCTGGCGCCAGCTGGAGCCGCATCCGTTGATCTTCGCGGGCCACGCGAGCGAGAACCGCCCGCTGCTCGACCTGGCGCTGGGCGCGGCCTCGGCCAGCCTGCAGGCTTTCTACGAAGTGCAGCGCAGCTCGACGGCGGTGGGGCTGGTCGCCGAACGCGTGGCGGCTGCGGTGGTGCCCCGGCTTGCTTTGCAGAAGGGCGCGTACCCCACGTTGCGCATCGTCGAGCTCACGGAACCCAAGGTGTCGCGCACCCTGGTGCTGATGACGCGCAAGACCGCGCGGCTTTCGCCGGCGGCGCAGGCGCTCTATGACCTGATCGAGGCGCAGGCCTCGGTGGCGCCTGCCGCGCGTCGGCGCTGA
PROTEIN sequence
Length: 304
MKIDILGIQAFVAIADEGSFQAAAGALNVTQTAITQRLRKLEEFLGVALVERTTRSVALTTIGRDFVPRARRLLVELADSLLEIRETGKAERGDVSIACVPTAGVQFLPRIMKAYSAKHPHNRIKILDHSSAAVANAVLHREVEFGIGMVGAHSPELQSVPLIEDEYVLICHEAHPLAQRKRIAWRQLEPHPLIFAGHASENRPLLDLALGAASASLQAFYEVQRSSTAVGLVAERVAAAVVPRLALQKGAYPTLRIVELTEPKVSRTLVLMTRKTARLSPAAQALYDLIEAQASVAPAARRR*