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SCNpilot_cont_300_bf_scaffold_118_curated_5

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 2944..3624

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=1 Tax=Variovorax sp. CF313 RepID=J2JN55_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 226.0
  • Bit_score: 436
  • Evalue 2.10e-119
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 226.0
  • Bit_score: 436
  • Evalue 2.90e-119
rplC; 50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 226.0
  • Bit_score: 435
  • Evalue 1.40e-119

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGAGTCTGAGCAACTCCCTCGGGTTGCTGGGCCGCAAGGTGGGGATGATGCGTCTCTTCACCGATGACGGGGATGCAGTTCCTGTCACGGTGGTGGATGTGTCCAACAACCGTGTGACCCAGATCAAGTCCCAAGAGACCGATGGCTACGTCGCCCTGCAAGTGACGTTCGGTTCGCGCAAAGCATCGCGCGTGACCAAGCCCGAAGCCGGCCACCTCGCCAAGGCGGGTGTCGAAGCAGGCGAAATCATCCAGGAATTCCGCGTTACCGCAGATACCGCAGGTCAGCACAAGGCTGGCGGCGTGATCGCCGTGAACAGCGTTTTCACCGTGGGCCAGAAGGTGGACGTGCAAGGCACCTCCATCGGCAAGGGCTACGCTGGCACGATCAAGCGTCACAACATGAGCTCGCAACGCGCGTCGCACGGTAACAGCCGTTCGCACAACGTTCCCGGCTCGATCGGTATGGCACAAGACCCCGGTCGCGTGTTCCCCGGCAAGCGCATGACGGGCCACCTCGGCGACGTCACCCGCACGACGCAAAACCTCGACGTGTTCCGCATCGACGAAGCACGCCAACTGCTGCTCATCAAGGGCGCGATCCCGGGTTCGAAGGGTGGCTTCGTCACCGTGCGTCCCGCCATCAAGGCCAAGCCGCAAGCGGCTGAAGGAGCGAAGTAA
PROTEIN sequence
Length: 227
MSLSNSLGLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQIKSQETDGYVALQVTFGSRKASRVTKPEAGHLAKAGVEAGEIIQEFRVTADTAGQHKAGGVIAVNSVFTVGQKVDVQGTSIGKGYAGTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTTQNLDVFRIDEARQLLLIKGAIPGSKGGFVTVRPAIKAKPQAAEGAK*