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SCNpilot_cont_300_bf_scaffold_118_curated_8

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 4579..5403

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L2 n=1 Tax=Variovorax sp. CF313 RepID=J2K7T3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 561
  • Evalue 5.10e-157
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 561
  • Evalue 7.20e-157
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 274.0
  • Bit_score: 560
  • Evalue 3.60e-157

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGGCCGTCATCAAGATGAAACCCACTTCGCCGGGCCAACGCGGCGCGGTGAAGATCTCGCGTGACCACCTGTTCAAGGGTGCTCCTCACGCTCCCCTGCTGGAACCCCAGTTCCAGAAGGCCGGCCGTAACAACAACGGTCACATCACGATCCGTCATCGTGGCGGCGGTGCCAAGCACCACTACCGCGTTGTCGACTTCGTGCGCAACAAGGACGGCATCCCGGCCAAGGTCGAACGCATCGAATACGACCCGAACCGCACCGCCCACATCGCGCTGGTCTGCTACGCCGACGGCGAGCGCCGCTACATCATCGCCCCGCGCGGTCTGGAAGCCGGTGCAACGCTGCTGTCGGGCGCCGAAGCGCCGATCCGCGCCGGCAACACCCTGCCGATCCGCAACATCCCGGTCGGCTCGACGATCCACTGCATCGAACTGCAACCCGGCAAGGGCGCGCAGATCGCTCGTTCGGCCGGTACGTCGGCCACGCTGCTGGCCCGCGAAGGCGTCTACGCCCAGGTCCGCATGCGTTCGGGCGAAGTTCGCCGCATTCACATCGAATGCCGCGCGACCATCGGTGAAGTTGCCAACGAAGAGCACAGCCTGCGCCAACTCGGCAAGGCCGGTGTGAAGCGTCACATGGGTATTCGCCCGACCGTTCGCGGCGTGGTGATGAACCCGGTCGACCACCCGCACGGTGGTGGCGAAGGCAAGACTGGCGAAGGCCGCCATCCTGTCGACCCATGGGGCAACCTGACCAAGGGCTATCGCACCCGTAACAACAAGCGCACGCAGGTCTTCATCGTGTCGCGTCGCAAGAAGTAA
PROTEIN sequence
Length: 275
MAVIKMKPTSPGQRGAVKISRDHLFKGAPHAPLLEPQFQKAGRNNNGHITIRHRGGGAKHHYRVVDFVRNKDGIPAKVERIEYDPNRTAHIALVCYADGERRYIIAPRGLEAGATLLSGAEAPIRAGNTLPIRNIPVGSTIHCIELQPGKGAQIARSAGTSATLLAREGVYAQVRMRSGEVRRIHIECRATIGEVANEEHSLRQLGKAGVKRHMGIRPTVRGVVMNPVDHPHGGGEGKTGEGRHPVDPWGNLTKGYRTRNNKRTQVFIVSRRKK*