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SCNpilot_cont_300_bf_scaffold_118_curated_7

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 4241..4576

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L23 n=4 Tax=Variovorax RepID=C5CP51_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 111.0
  • Bit_score: 214
  • Evalue 6.30e-53
50S ribosomal protein L25/l23; K02892 large subunit ribosomal protein L23 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 111.0
  • Bit_score: 214
  • Evalue 2.00e-53
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 111.0
  • Bit_score: 214
  • Evalue 8.80e-53

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGAGCCGCGTGAACCCTACCGCCGCTGAACGTACGTTCGAAGAAGGCCGCCTGATGGCGGTGCTGGTCGCCCCGATCGTGTCCGAAAAGGCCACGATGGTCGGCGAGAAGTCGAACGCTGTCACTTTCAAGGTGCTGCAAGACGCCACCAAGCCCGAGATCAAGGCCGCTGTCGAACTGATGTTCAAGGTCGAAGTCCAGGGCGTGTCGGTGCTCAACACCAAGGGCAAGACCAAGCGCTTTGGCAAGTCCATCGGCCGCCGCGACAACGTGCGCAAGGCCTATGTGACCCTGAAGCCGGGTCAAGAGCTCAACCTCGTCGGGGAAGGCGCTTAA
PROTEIN sequence
Length: 112
MSRVNPTAAERTFEEGRLMAVLVAPIVSEKATMVGEKSNAVTFKVLQDATKPEIKAAVELMFKVEVQGVSVLNTKGKTKRFGKSIGRRDNVRKAYVTLKPGQELNLVGEGA*