ggKbase home page

SCNpilot_cont_300_bf_scaffold_118_curated_12

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 7016..7432

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L16 n=2 Tax=Variovorax RepID=E6VBD9_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 138.0
  • Bit_score: 277
  • Evalue 9.80e-72
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 138.0
  • Bit_score: 277
  • Evalue 3.10e-72
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 138.0
  • Bit_score: 277
  • Evalue 1.40e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGCTGCAACCTGCACGCAGAAAGTTCCGCAAGGAACAAAAGGGCCGCAACACCGGCATCGCAACCACGGGTAACTCGGTTGCGTTCGGTGACTTCGGTCTCAAATGCACCGACCGCGGCCGCCTCACGGCGCGCCAGATCGAAGCCGCTCGTCGCGCGATCTCGCGTCACGTGAAGCGCGGTGGCCGTATCTGGATCCGCGTGTTCCCGGACAAGCCGATCTCGACCAAGCCCGCAGAAGTGCGGATGGGTAACGGTAAGGGCAACCCCGAGTACTACGTCGCTGAAATTCAGCCTGGCAAGATCGTGTTCGAGATCGTCGGCGTGCCCGAAGAACTCGCCCGCGAAGCGTTCCGCCTGGCCGCCGCCAAGCTTCCGCTGCGTACGACTTTCGTCGCTCGCCAGCTCGGCGCCTGA
PROTEIN sequence
Length: 139
MLQPARRKFRKEQKGRNTGIATTGNSVAFGDFGLKCTDRGRLTARQIEAARRAISRHVKRGGRIWIRVFPDKPISTKPAEVRMGNGKGNPEYYVAEIQPGKIVFEIVGVPEELAREAFRLAAAKLPLRTTFVARQLGA*