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SCNpilot_cont_300_bf_scaffold_118_curated_13

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 7446..7697

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L29 n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CP45_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 83.0
  • Bit_score: 158
  • Evalue 4.00e-36
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 83.0
  • Bit_score: 158
  • Evalue 1.30e-36
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 83.0
  • Bit_score: 158
  • Evalue 5.60e-36

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGGCAACCCGTAAGAAGAAAGAAACCGCGGCTCCGGCCAAGGTGACGAAGGCCGCAACCCTGCGCACGAAGGACGTCGCAGGCCTGCAAGCCGAAATCAAGGATCTGCAGAAGGCCCATTTCGGTCTGCGCATGCAGAAAGCCACGCAACAGCTGTCGAACACCTCGACGCTGCGCGTGACGCGTCGCGACATCGCGCGCGCCAAGACCATTCTTGCTCAGAAGCAGCAAGAAACCCAAGCCGCCAAGTAA
PROTEIN sequence
Length: 84
MATRKKKETAAPAKVTKAATLRTKDVAGLQAEIKDLQKAHFGLRMQKATQQLSNTSTLRVTRRDIARAKTILAQKQQETQAAK*