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SCNpilot_cont_300_bf_scaffold_118_curated_14

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 7707..7976

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S17 n=2 Tax=Variovorax paradoxus RepID=RS17_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 175
  • Evalue 2.60e-41
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 175
  • Evalue 8.10e-42
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 175
  • Evalue 3.60e-41

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGACGGAAGCTAAAAAATCCCTCAAGCGCACCTTGATCGGCAAGGTGGTCAGCGACAAGCGTGCCAAGACCGTGACCGTGCTGGTCGAGCGCCGTGTGAAGCACGAGCTCTACGGCAAGATCGTGGCCAAGACGAGCAAGTACCACGCCCATGACGAAAAGGGCGAGTACAAGCTGGGCGACACCATCGAGATCACGGAAAGCCGTCCGATCTCGAAGACCAAGAACTGGGTCGTGACCCGTCTGGTCGAGAAGGCCGTTCTGGTCTGA
PROTEIN sequence
Length: 90
MTEAKKSLKRTLIGKVVSDKRAKTVTVLVERRVKHELYGKIVAKTSKYHAHDEKGEYKLGDTIEITESRPISKTKNWVVTRLVEKAVLV*