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SCNpilot_cont_300_bf_scaffold_118_curated_28

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 16678..17064

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035C567C similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 125.0
  • Bit_score: 191
  • Evalue 6.50e-46
Variovorax paradoxus strain MEDvA23 contig_22, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33402.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 123.0
  • Bit_score: 193
  • Evalue 1.40e-46
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 121.0
  • Bit_score: 178
  • Evalue 1.40e-42

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGGTGAGCACCGTCGCCGCTCCTGTCATGCGACCGCGCACCGCGCGCGCATGGATGCTGGCCGAGGCGTTCACGCTCGGCGTCGCGTCGACGGTGCATGCCGGTTACCTCGTGCCGGGCCACGCGCATGCGCAGGCGCGCATCGCCGAGGCGGTGATCGCAACGGTGCTGGTGCTGGCGTCGGTCGAGACCTGGCTGCGCCCCCCGCATGCGCGGCGTGCCGCCATCTTCGGCCAGGGCTTCGCGCTGCTGGGCACGCTGGTCGGGCTGGGCACCATCGTCGCCGGCATCGGACCCGGCTCCGTGGGCGACGTGGTCTACCACGCGCTCCTGCTCTCATTCCTCGTGACGGGCCTGGCCTGGGCGGTGCGATGCCGGCCGGTCTGA
PROTEIN sequence
Length: 129
MVSTVAAPVMRPRTARAWMLAEAFTLGVASTVHAGYLVPGHAHAQARIAEAVIATVLVLASVETWLRPPHARRAAIFGQGFALLGTLVGLGTIVAGIGPGSVGDVVYHALLLSFLVTGLAWAVRCRPV*