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SCNpilot_cont_300_bf_scaffold_118_curated_59

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 45301..46848

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 513.0
  • Bit_score: 931
  • Evalue 1.50e-268
ABC-type sugar transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J2KDJ4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 510.0
  • Bit_score: 931
  • Evalue 2.70e-268
ABC-type sugar transport system, ATPase component {ECO:0000313|EMBL:EJL78290.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 510.0
  • Bit_score: 931
  • Evalue 3.80e-268

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1548
ATGAACGGCGACAGCGCAATGGGCAACAAGGCCAGCGTCGCCGTCGAGTTCGACGGCGTGGTCAAGGCCTTCGGCCCGGTGCAGGTGCTGCACGGCGTGAGCTTCGCGCTCGCGCCCGGACGCGTGTACGGCCTGCTCGGCGAGAACGGCGCGGGCAAGTCGACGCTGATGAAGATCCTCGCGGGCTACGAACAGCTCACCGGCGGCACGCTGCGCATCAACGGCCAGCCGCAGCAGTTCGGCAGCTCGCGCGATGCCGAGGCGCTGGGCATCGTGCTGATCCACCAGGAGTTCAACCTCGCCGAAGACCTGAGCGTGGCGCAGAACATCTTCCTGGGCCATGAAAAGAAGAAGGGCTGGCTGCTCGACGACGCGGCCATGGAGCGCGAAGCCGCCGCCGCGCTGTCGGCCGTCGGCCTGAACATCGACCCGCGCACCAAGGTGCGAAAGCTCATCGTCGCCGAGAAGCAGCTCGTCGAGATCGCGAAGGCCATTGCCCGCCGCGCGCGCCTGCTCGTCATGGACGAGCCCACCGCCACGCTCACGCCGGGCGAGACCGAACGGCTGTTCAAGCTCATCGCGCAGTTGCGCGCGGACGGCGTGACCATCGTCTACATCTCGCACAAGCTCGACGAGGTGGAGCAGGTGACCGACGAGGTGATCGTCATGCGCGACGGCCGCTTCGTCGCGCGCGCGCCCACGCCCGAGGTCACGCGCCAGCAGATGGCCAACCTCATGGTGGGCCGCGAGCTGGCCGACCTGTACCCGCCGCGCGACGTGGTGGTGGCCGCCGACGCGCCGGCCATGCGCGTTCGTGATTTCAATGTGCCCGGCTGGGCGCAAGACGCGAGCTTCGAGGTGCGCCCCGGCGAGATCCTCGGTTTCGCGGGCCTTGTCGGCGCGGGCCGCACCGAACTCTTCGAAGGCCTGCTCGGCCTGCGCCCCGCGAGCGGCAACGTCGAGATGCTCGGCAAGCCCGTGCCCGGCGGCAAGGGCTGGCGCAACCCGCGCGACGCGGCGAAGCACGGCCTTACCTACCTGAGCGAAGACCGCAAGGGCAAGGGCCTGCACGTCAACTTCGGCCTGCGCCAGAACCTCACGCTGATGGCGCTCGAACGCTATGCGCAGCCCTGGCTCAGGCCCGAGGCCGAACGCGGCGCGCTGGCCGGCGCGGTGAAGGAATACGGCATTCGCACCGGATCGCTCGAGGTCAAGGCCTCGTCGCTGTCGGGCGGCAACCAGCAGAAGCTCGCGCTCGCCAAGGTGCTGCAGCCGCGGCCGAAGGTGGTGGTGCTCGACGAGCCCACGCGCGGCGTGGACGTGGGCGCCAAGCGCGACATCTATTTCCTGATCCAGCGACTGGCCCGCGAAGGGCTCGCGGTGATCGTCGTCTCGTCGGAGCTGATGGAGCTGATCGGCCTGTGCCACCGCGTCGCGGTGATGCGCGCGGGCCGGCTGGTCGCCACGCTCGACGCGGACCATTTGACAGAAGAGGAGCTCATCGCTCATGCCACCGGAACAGCAGACACCACCGCCGCGCACGCCTGA
PROTEIN sequence
Length: 516
MNGDSAMGNKASVAVEFDGVVKAFGPVQVLHGVSFALAPGRVYGLLGENGAGKSTLMKILAGYEQLTGGTLRINGQPQQFGSSRDAEALGIVLIHQEFNLAEDLSVAQNIFLGHEKKKGWLLDDAAMEREAAAALSAVGLNIDPRTKVRKLIVAEKQLVEIAKAIARRARLLVMDEPTATLTPGETERLFKLIAQLRADGVTIVYISHKLDEVEQVTDEVIVMRDGRFVARAPTPEVTRQQMANLMVGRELADLYPPRDVVVAADAPAMRVRDFNVPGWAQDASFEVRPGEILGFAGLVGAGRTELFEGLLGLRPASGNVEMLGKPVPGGKGWRNPRDAAKHGLTYLSEDRKGKGLHVNFGLRQNLTLMALERYAQPWLRPEAERGALAGAVKEYGIRTGSLEVKASSLSGGNQQKLALAKVLQPRPKVVVLDEPTRGVDVGAKRDIYFLIQRLAREGLAVIVVSSELMELIGLCHRVAVMRAGRLVATLDADHLTEEELIAHATGTADTTAAHA*