ggKbase home page

SCNpilot_cont_300_bf_scaffold_118_curated_60

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 46808..47842

Top 3 Functional Annotations

Value Algorithm Source
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporters n=1 Tax=Variovorax sp. CF313 RepID=J3CU66_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 344.0
  • Bit_score: 641
  • Evalue 4.90e-181
inner-membrane translocator; K10440 ribose transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 345.0
  • Bit_score: 641
  • Evalue 2.00e-181
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporters {ECO:0000313|EMBL:EJL78291.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 344.0
  • Bit_score: 641
  • Evalue 6.90e-181

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGCCACCGGAACAGCAGACACCACCGCCGCGCACGCCTGAAGCCGCGCAGCAGCAGCACCGCGGCGAGGCCAAGCCGCGCTGGACCGAGCGCCTGCACGGGCTCGGCCCGGTCATCGGCCTGGTGCTGCTGTGCATCGCCGGCACGCTGCTGAACGGCGACTTCGCCACGCTCGACAACGCGATGAACGTGCTCACGCGCACCGCCTTCATCGGCATCATCGCGGTGGGCATGTGCTTCGTGATCATCTCGGGCGGCATCGACCTGTCGGTGGGCTCGATGGCCGCGCTCATCGCGGGCAGTGTGATCATGTTCATCAACTGGGCCGGGCCGGCCTCGGGCTCGCCGCTGCTGGCGGTGGTGATGGGCGCGGTGCTGGCCATCGTGCTGGGCGCGGTGTTCGGGCTGGCGCACGGCCTGCTCATCACCAAGGGGCGCATCGAGCCCTTCATCGTGACGCTGGGCACGCTCGGCATCTTCCGCGCCTACCTCACCTACTTTGCCGACGGCGGCGCGCTCACCCTCGACAACGACCTGTCGGACCTCTACGCACCGGTGTACTACGCAAGCCTCGCGGGCATTCCGGTGCCGGTGTGGGTGTTCGTGATCGTCGCGATCATCGGCGGCGTCATATTGAACCGTACCGCCTACGGGCGTTACGTGCAGGCCATCGGCTCGAACGAGCAGGTCGCGCGCTACGCCGCCGTGGACGTCGACCGCGTGAAGATCCTCACCTACGTGCTGCTGGGCGTGTGCGTGGGCATCGCCACCCTGCTGTACGTGCCGCGCCTGGGCTCGGCCTCGCCGACCACCGGCCTGCTGTGGGAGCTGGAAGCCATTGCCGCGGTGATCGTCGGCGGCACCGCGCTCAAGGGCGGCGCGGGCAGCATCACCGGCACCGTGGTGGGCGCGATCTTGCTCTCGGTCATCAGCAACATCCTGAACCTCACCAGCATCATCAGCGTGTACCTGAACGCCGCGGTGCAGGGCTTCGTGATCATCATCGTCGCGTTCCTGCAGCGAGGACGCCGCTGA
PROTEIN sequence
Length: 345
MPPEQQTPPPRTPEAAQQQHRGEAKPRWTERLHGLGPVIGLVLLCIAGTLLNGDFATLDNAMNVLTRTAFIGIIAVGMCFVIISGGIDLSVGSMAALIAGSVIMFINWAGPASGSPLLAVVMGAVLAIVLGAVFGLAHGLLITKGRIEPFIVTLGTLGIFRAYLTYFADGGALTLDNDLSDLYAPVYYASLAGIPVPVWVFVIVAIIGGVILNRTAYGRYVQAIGSNEQVARYAAVDVDRVKILTYVLLGVCVGIATLLYVPRLGSASPTTGLLWELEAIAAVIVGGTALKGGAGSITGTVVGAILLSVISNILNLTSIISVYLNAAVQGFVIIIVAFLQRGRR*