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SCNpilot_cont_1000_p_scaffold_1017_curated

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1017_curated_1
unknown

Not on your lists

comp(2..220)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1017_curated_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(217..1050)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWC2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21714.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1017_curated_3
unknown

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comp(1013..1495)
DNA (483bp) protein (161aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1017_curated_4
unknown

Not on your lists

comp(1443..1979)
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1017_curated_5
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

2306..3727
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 PF6_9BACT">RepID=A6DPF6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDM26452.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
major facilitator transporter
SCNpilot_cont_1000_p_scaffold_1017_curated_6
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3715..5721)
DNA (2007bp) protein (669aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QR92_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO54747.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
LamG domain-containing protein jellyroll fold domain-containing protein
SCNpilot_cont_1000_p_scaffold_1017_curated_7
unknown

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5859..6398
DNA (540bp) protein (180aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1017_curated_8
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6427..8499)
DNA (2073bp) protein (691aa)
sialate O-acetylesterase (EC:3.1.1.53); K05970 sialate O-acetylesterase [EC:3.1.1.53]
sialate O-acetylesterase n=1 Tax=Schlesneria paludicola RepID=UPI00029B1C89
Tax=RBG_16_Planctomycetes_64_10_curated
SCNpilot_cont_1000_p_scaffold_1017_curated_9
unknown

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comp(8509..9228)
DNA (720bp) protein (240aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1017_curated_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9225..10250)
DNA (1026bp) protein (342aa)
G-D-S-L family lipolytic protein; K10804 acyl-CoA thioesterase I [EC:3.1.2.- 3.1.1.5]
Lipolytic protein G-D-S-L family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBI5_9BACT
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:EDY16172.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1017_curated_11
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(10247..13111)
DNA (2865bp) protein (955aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BYZ2_ANAMD
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCNpilot_cont_1000_p_scaffold_1017_curated_12
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(13135..15861)
DNA (2727bp) protein (909aa)
FAD dependent oxidoreductase n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3CV27_9BACT
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCNpilot_cont_1000_p_scaffold_1017_curated_13
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15953..16948)
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Bacteroides stercoris RepID=B0NSW8_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS14894.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Predicted glycosylase
SCNpilot_cont_1000_p_scaffold_1017_curated_14
Ovis aries, Ovis, Mammalia, Chordata, Metazoa

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comp(17070..18065)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379BEE8
Uncharacterized protein {ECO:0000313|Ensembl:ENSOARP00000011462}; Flags: Fragment;; TaxID=9940 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis.;" source="Ovis aries (Sheep).;"
outer membrane autotransporter barrel protein
SCNpilot_cont_1000_p_scaffold_1017_curated_15
Geobacillus sp. GHH01, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18147..19229)
DNA (1083bp) protein (361aa)
DUF1861 family protein n=1 Tax=Geobacillus sp. GHH01 RepID=L8A485_9BACI
DUF1861 family protein
DUF1861 family protein {ECO:0000313|EMBL:AGE23831.1}; TaxID=1233873 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. GHH01.;"
SCNpilot_cont_1000_p_scaffold_1017_curated_16
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19240..20166
DNA (927bp) protein (309aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB11314.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
AraC-type DNA-binding domain-containing protein-like protein id=4476231 bin=GWF2_Lentisphaerae_49_21 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
AraC family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1017_curated_17
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

20306..22360
DNA (2055bp) protein (685aa)
Carbon starvation protein CstA n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZS08_OPITP
carbon starvation protein CstA; K06200 carbon starvation protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
SCNpilot_cont_1000_p_scaffold_1017_curated_18
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

22462..24990
DNA (2529bp) protein (843aa)
Uncharacterized protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EY11_9BACT
GxGYxY sequence motif in domain of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CCW36599.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
SCNpilot_cont_1000_p_scaffold_1017_curated_19
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

25579..25932
DNA (354bp) protein (118aa)
Mg chelatase, subunit ChlI n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7Q2_9BACT
Putative chaperone; K07391 magnesium chelatase family protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
SCNpilot_cont_1000_p_scaffold_1017_curated_20
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(26286..28064)
DNA (1779bp) protein (593aa)
Na+/proline symporter n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AXX0_9BACT
Na+/proline symporter {ECO:0000313|EMBL:EIP99861.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
Na+/solute symporter
SCNpilot_cont_1000_p_scaffold_1017_curated_21
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28160..29155)
DNA (996bp) protein (332aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5YF42_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS19707.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1017_curated_22
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(29246..30652)
DNA (1407bp) protein (469aa)
Endopolygalacturonase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EWP8_9BACT
Endopolygalacturonase
Endopolygalacturonase {ECO:0000313|EMBL:CCW36339.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
SCNpilot_cont_1000_p_scaffold_1017_curated_23
unknown

Not on your lists

comp(30728..30892)
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 23 items

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