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SCNpilot_cont_1000_p_scaffold_2506_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2506_curated_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3..665)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAY2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16356.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2506_curated_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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780..1574
DNA (795bp) protein (265aa)
Metallophosphoesterase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D067_9BACT
Metallophosphoesterase {ECO:0000313|EMBL:EDY20381.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
metallophosphoesterase; K09769 hypothetical protein
SCNpilot_cont_1000_p_scaffold_2506_curated_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1575..2378)
DNA (804bp) protein (268aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBK8_9BACT
ABC transporter-related protein {ECO:0000313|EMBL:EDY16195.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2506_curated_4

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comp(2360..4663)
DNA (2304bp) protein (768aa)
predicted hydrolase of metallo-beta-lactamase fold protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744361
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49252.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC
SCNpilot_cont_1000_p_scaffold_2506_curated_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4660..5208)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYY2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20673.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2506_curated_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5212..6399)
DNA (1188bp) protein (396aa)
deoxyhypusine synthase-like protein; K00809 deoxyhypusine synthase [EC:2.5.1.46] rbh
Deoxyhypusine synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYY1_9BACT
Deoxyhypusine synthase {ECO:0000313|EMBL:EDY20672.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2506_curated_7
unknown

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comp(6419..6934)
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2506_curated_8
Brassica rapa, Brassica, Brassicales, rosids, Streptophyta, Viridiplantae

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7020..7817
DNA (798bp) protein (266aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|RuleBase:RU003903}; EC=1.5.1.2 {ECO:0000256|RuleBase:RU003903};; TaxID=51351 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.;" source="Brassica rapa subsp. pekinensis (Chinese cabbage) (Brassica; pekinensis).;"
hypothetical protein; K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2]
Pyrroline-5-carboxylate reductase n=1 Tax=Brassica rapa subsp. pekinensis RepID=M4CPY1_BRARP
SCNpilot_cont_1000_p_scaffold_2506_curated_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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7817..8563
DNA (747bp) protein (249aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUH3_9BACT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EDY22211.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
nrfG; TPR repeats containing protein
SCNpilot_cont_1000_p_scaffold_2506_curated_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(8618..9232)
DNA (615bp) protein (205aa)
YceI family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPP5_9BACT
YceI family protein {ECO:0000313|EMBL:EEF58168.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2506_curated_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9229..9492)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPP4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58167.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
SCNpilot_cont_1000_p_scaffold_2506_curated_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9587..9856)
DNA (270bp) protein (90aa)
Iron-sulfur cluster-binding protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D343_9BACT
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EDY19154.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
napF; Ferredoxin
SCNpilot_cont_1000_p_scaffold_2506_curated_13
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9885..12155)
DNA (2271bp) protein (757aa)
MscS Mechanosensitive ion channel n=1 Tax=Rhodopirellula baltica WH47 RepID=F2AZF0_RHOBT
mechanosensitive ion channel family protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
SCNpilot_cont_1000_p_scaffold_2506_curated_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12152..13495)
DNA (1344bp) protein (448aa)
Peptidase M20 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU47_9BACT
Peptidase M20 {ECO:0000313|EMBL:EDY22085.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
peptidase M20
SCNpilot_cont_1000_p_scaffold_2506_curated_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13610..14305
DNA (696bp) protein (232aa)
Chromosome partition protein Smc n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D705_9BACT
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
chromosome segregation protein SMC; K03529 chromosome segregation protein
SCNpilot_cont_1000_p_scaffold_2506_curated_16
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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14328..17876
DNA (3549bp) protein (1183aa)
Chromosome partition protein Smc n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D705_9BACT
chromosome segregation protein SMC; K03529 chromosome segregation protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_2506_curated_17
unknown

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17889..18053
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2506_curated_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(18073..19188)
DNA (1116bp) protein (372aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZL8_9BACT
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:EDY20182.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2506_curated_19
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

19271..20623
DNA (1353bp) protein (451aa)
Na+/H+ antiporter n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QD69_9CYAN
Na+/H+ antiporter
Na+/H+ antiporter {ECO:0000313|EMBL:AGY56806.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
Displaying 19 items

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