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SCNpilot_cont_1000_p_scaffold_4525_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_4525_curated_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3..77
DNA (75bp) protein (25aa)
Peptidase M22 glycoprotease n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D451_9BACT
Peptidase M22 glycoprotease {ECO:0000313|EMBL:EDY18652.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4525_curated_2
unknown

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comp(74..667)
DNA (594bp) protein (198aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4525_curated_3
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(664..1044)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745115
tRNA threonylcarbamoyl adenosine modification protein YjeE {ECO:0000313|EMBL:ERT60090.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
hypothetical protein; K06925 UPF0079 ATP-binding protein
SCNpilot_cont_1000_p_scaffold_4525_curated_4
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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1146..2726
DNA (1581bp) protein (527aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
pgi; glucose-6-phosphate isomerase; K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IUV7_9BACT
SCNpilot_cont_1000_p_scaffold_4525_curated_5
unknown

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2726..3097
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4525_curated_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3116..3775)
DNA (660bp) protein (220aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVP8_9BACT
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:EDY21490.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphatase/phosphohexomutase HAD superfamily
SCNpilot_cont_1000_p_scaffold_4525_curated_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3772..5037)
DNA (1266bp) protein (422aa)
Peptidase M16 domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D704_9BACT
Peptidase M16 domain protein {ECO:0000313|EMBL:EDY17655.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PqqL; Zn-dependent peptidase
SCNpilot_cont_1000_p_scaffold_4525_curated_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5034..5723)
DNA (690bp) protein (230aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D703_9BACT
SCNpilot_cont_1000_p_scaffold_4525_curated_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5720..6172)
DNA (453bp) protein (151aa)
GatB/YqeY domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D702_9BACT
GatB/YqeY domain protein {ECO:0000313|EMBL:EDY17653.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
GatB/YqeY domain-containing protein; K09117 hypothetical protein
SCNpilot_cont_1000_p_scaffold_4525_curated_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6308..7621
DNA (1314bp) protein (438aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamate--tRNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ9_9BACT
SCNpilot_cont_1000_p_scaffold_4525_curated_11
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7629..8312)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZCP6_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:GAD58822.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4525_curated_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(8318..9025)
DNA (708bp) protein (236aa)
Mammalian cell entry related domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTT9_9BACT
Mammalian cell entry related domain protein {ECO:0000313|EMBL:EDY21977.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Displaying 12 items

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