ggKbase home page

SCNpilot_cont_1000_p_scaffold_5389_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5389_curated_1
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..408)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MNK1_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE06107.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
SCNpilot_cont_1000_p_scaffold_5389_curated_2
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(417..713)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NRZ8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EAT04491.1}; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5389_curated_3
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(679..1044)
DNA (366bp) protein (122aa)
Conserved uncharacterized protein, DUF891 n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NK12_DESTT
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_cont_1000_p_scaffold_5389_curated_4
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1118..2089)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744B2E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD05959.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
SCNpilot_cont_1000_p_scaffold_5389_curated_5

Not on your lists

comp(2086..2817)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4T7_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48648.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5389_curated_6

Not on your lists

comp(2878..3405)
DNA (528bp) protein (176aa)
Elongation factor P n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4T6_9BACT
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
translation elongation factor P; K02356 elongation factor P
SCNpilot_cont_1000_p_scaffold_5389_curated_7
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3482..4453)
DNA (972bp) protein (324aa)
gutQ; Arabinose 5-phosphate isomerase and CBS domains; K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13]
KpsF/GutQ family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBN6_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_5389_curated_8
unknown

Not on your lists

4866..5165
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_5389_curated_9

Not on your lists

5212..6297
DNA (1086bp) protein (362aa)
glycosyltransferase; K01043 [EC:2.-.-.-]
Glycosyl transferase group 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBN4_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49399.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_5389_curated_10
Shewanella sp. MR-7, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6373..6987
DNA (615bp) protein (205aa)
carbonate dehydratase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=60481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. (strain MR-7).;"
Carbonic anhydrase n=1 Tax=Shewanella sp. (strain ANA-3) RepID=A0KWH1_SHESA
SCNpilot_cont_1000_p_scaffold_5389_curated_11
Synechococcus sp. PCC 7002, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7066..7521)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI00037D1DB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA98714.1}; TaxID=32049 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum; quadruplicatum).;"
SCNpilot_cont_1000_p_scaffold_5389_curated_12
unknown

Not on your lists

7708..7815
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 12 items

View Taxonomy