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SCNpilot_cont_1000_p_scaffold_1295_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1295_curated_1
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1..720)
DNA (720bp) protein (240aa)
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI000362AF1B
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_1295_curated_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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789..1814
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW05_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21597.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1295_curated_3
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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1814..2554
DNA (741bp) protein (247aa)
farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21)
Phytoene/squalene synthetase id=3972421 bin=GWA2_Elusimicrobia_69_24 species=uncultured gamma proteobacterium HF0770_07M15 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
SCNpilot_cont_1000_p_scaffold_1295_curated_4
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2562..5993)
DNA (3432bp) protein (1144aa)
hypothetical protein, partial n=1 Tax=Streptomyces sp. LaPpAH-202 RepID=UPI00037B62A7
Polyketide synthase type I {ECO:0000313|EMBL:KCZ97301.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha PS728.;"
polyketide synthase type I
SCNpilot_cont_1000_p_scaffold_1295_curated_5
GWA2_WOR_2_53_43_curated, WOR-2, Bacteria

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comp(6018..7721)
DNA (1704bp) protein (568aa)
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] rbh
Dihydroxy-acid dehydratase id=4695542 bin=GWA2_OP3_53_43 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
Tax=GWA2_WOR_2_53_43_curated
SCNpilot_cont_1000_p_scaffold_1295_curated_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(7786..9168)
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00036B760A
Uncharacterized protein {ECO:0000313|EMBL:EDY20590.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
TPR repeat-containing protein
SCNpilot_cont_1000_p_scaffold_1295_curated_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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9177..9713
DNA (537bp) protein (179aa)
alkyl hydroperoxide reductase; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0W8_9BACT
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EDY19980.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1295_curated_8
unknown

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10003..10359
DNA (357bp) protein (119aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1295_curated_9
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(10391..12508)
DNA (2118bp) protein (706aa)
pknB; serine/threonine kinase Pkn10 (EC:2.7.1.-); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] rbh
Serine/threonine protein kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7E8_9BACT
Tax=RBG_16_Planctomycetes_64_12_curated
SCNpilot_cont_1000_p_scaffold_1295_curated_10
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(12552..13292)
DNA (741bp) protein (247aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7E9_9BACT
DNA-directed RNA polymerase subunit sigma24
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCNpilot_cont_1000_p_scaffold_1295_curated_11
unknown

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comp(13375..13839)
DNA (465bp) protein (155aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1295_curated_12
unknown

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13928..14482
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1295_curated_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

14583..15395
DNA (813bp) protein (271aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR66_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EEF57679.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
SCNpilot_cont_1000_p_scaffold_1295_curated_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15392..16648
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR65_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57678.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1295_curated_15
Ophiostoma piceae, Ophiostoma, Ophiostomatales, Sordariomycetidae, Ascomycota, Fungi

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comp(16665..17510)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Ophiostoma piceae (strain UAMH 11346) RepID=S3CUS9_OPHP1
Uncharacterized protein {ECO:0000313|EMBL:EPE04490.1}; TaxID=1262450 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomataceae; Ophiostoma.;" source="Ophiostoma piceae (strain UAMH 11346) (Sap stain fungus).;"
SCNpilot_cont_1000_p_scaffold_1295_curated_16
unknown

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comp(17608..18933)
DNA (1326bp) protein (442aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1295_curated_17
unknown

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comp(18968..19852)
DNA (885bp) protein (295aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1295_curated_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(20025..20897)
DNA (873bp) protein (291aa)
Sel1 domain protein repeat-containing protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D859_9BACT
Sel1 domain-containing protein repeat-containing protein; K07126
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:EDY17413.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1295_curated_19
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(20984..23254)
DNA (2271bp) protein (757aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWX1_OPITP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
SCNpilot_cont_1000_p_scaffold_1295_curated_20
Burkholderia sp. TJI49, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(23220..24746)
DNA (1527bp) protein (509aa)
Filamentous hemagglutinin outer membrane protein (Fragment) n=1 Tax=Burkholderia sp. TJI49 RepID=F0GE46_9BURK
Filamentous hemagglutinin outer membrane protein {ECO:0000313|EMBL:EGD00234.1}; Flags: Fragment;; TaxID=987057 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. TJI49.;"
Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system
Displaying 20 items

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