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SCNpilot_cont_1000_p_scaffold_2156_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2156_curated_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1..2118
DNA (2118bp) protein (706aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Multi-sensor hybrid histidine kinase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HP17_CYAP4
multi-sensor hybrid histidine kinase
SCNpilot_cont_1000_p_scaffold_2156_curated_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2390..2656
DNA (267bp) protein (89aa)
30S ribosomal protein S20 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBH8_9BACT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
s20: ribosomal protein S20
SCNpilot_cont_1000_p_scaffold_2156_curated_3
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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2683..3918
DNA (1236bp) protein (412aa)
peptidase dimerisation domain-containing protein; K01295 glutamate carboxypeptidase [EC:3.4.17.11]
carboxypeptidase G2 id=4207888 bin=GWF2_Lentisphaerae_52_8 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=RBG_16_Chloroflexi_57_11_curated
SCNpilot_cont_1000_p_scaffold_2156_curated_4
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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3915..4943
DNA (1029bp) protein (343aa)
chloromuconate cycloisomerase YkfB1 n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746AFF
mandelate racemase
Tax=CG_Anaero_02
SCNpilot_cont_1000_p_scaffold_2156_curated_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(4918..6036)
DNA (1119bp) protein (373aa)
amiC; N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
Cell wall hydrolase/autolysin n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXU6_9BACT
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:EDY21094.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2156_curated_6
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(6083..7501)
DNA (1419bp) protein (473aa)
Carbohydrate-selective porin OprB n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0G0_9BACT
carbohydrate-selective porin, OprB family; K07267 porin
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_2156_curated_7
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(7571..8716)
DNA (1146bp) protein (382aa)
glucose sorbosone dehydrogenase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255D46A
glucose sorbosone dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
SCNpilot_cont_1000_p_scaffold_2156_curated_8
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8776..9123
DNA (348bp) protein (116aa)
L-sorbosone dehydrogenase n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4AQX1_MARSH
L-sorbosone dehydrogenase
L-sorbosone dehydrogenase {ECO:0000313|EMBL:EAR01860.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain HTCC2170 / KCCM 42371).;"
SCNpilot_cont_1000_p_scaffold_2156_curated_9
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(9127..9765)
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IZX3_9BACT
N-terminal cleavage protein {ECO:0000313|EMBL:AHF89710.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
SCNpilot_cont_1000_p_scaffold_2156_curated_10
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(9815..12373)
DNA (2559bp) protein (853aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
leucyl-tRNA synthetase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B77
SCNpilot_cont_1000_p_scaffold_2156_curated_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


12392..13015
DNA (624bp) protein (208aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobact
Ham1 family protein; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI000376ACB9
SCNpilot_cont_1000_p_scaffold_2156_curated_12
unknown

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comp(13181..13630)
DNA (450bp) protein (150aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2156_curated_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(13685..14581)
DNA (897bp) protein (299aa)
6-phosphogluconate dehydrogenase NAD-binding n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ05_9BACT
6-phosphogluconate dehydrogenase NAD-binding {ECO:0000313|EMBL:EEF58102.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
6-phosphogluconate dehydrogenase
SCNpilot_cont_1000_p_scaffold_2156_curated_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(14581..15393)
DNA (813bp) protein (271aa)
Beta-lactamase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0D6_9BACT
Beta-lactamase domain protein {ECO:0000313|EMBL:EDY19798.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
gloB; Zn-dependent hydrolase, glyoxylase family
SCNpilot_cont_1000_p_scaffold_2156_curated_15
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(15398..16105)
DNA (708bp) protein (236aa)
ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3L1_9BACT
ABC transporter
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_2156_curated_16
unknown

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16718..16933
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2156_curated_17
unknown

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17083..18969
DNA (1887bp) protein (629aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2156_curated_18
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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18966..20033
DNA (1068bp) protein (356aa)
phospho-2-dehydro-3-deoxyheptonate aldolase; K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAV8_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Displaying 18 items

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