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SCNpilot_cont_1000_p_scaffold_1866_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1866_curated_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(3..2075)
DNA (2073bp) protein (691aa)
S-layer domain protein n=1 Tax=Paenibacillus sp. Aloe-11 RepID=H6CFQ3_9BACL
hypothetical protein
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
SCNpilot_cont_1000_p_scaffold_1866_curated_2
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2283..3278)
DNA (996bp) protein (332aa)
Putative phosphatase/phosphohexomutase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FF58_9CLOT
Putative phosphatase/phosphohexomutase {ECO:0000313|EMBL:EMS69037.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
SCNpilot_cont_1000_p_scaffold_1866_curated_3
Paenibacillus sp. FSL H7-0357, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3275..6037)
DNA (2763bp) protein (921aa)
Alpha-mannosidase; K15524 mannosylglycerate hydrolase [EC:3.2.1.170]
Uncharacterized protein {ECO:0000313|EMBL:AIQ15502.1}; TaxID=1536774 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0357.;"
Alpha-mannosidase id=3806850 bin=GWF2_Lentisphaerae_49_21 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
SCNpilot_cont_1000_p_scaffold_1866_curated_4
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(6047..7252)
DNA (1206bp) protein (402aa)
Periplasmic component of the Tol biopolymer transport system n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AV39_9BACT
Periplasmic component of the Tol biopolymer transport system {ECO:0000313|EMBL:EIP98880.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
SCNpilot_cont_1000_p_scaffold_1866_curated_5
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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comp(7271..8785)
DNA (1515bp) protein (505aa)
sialate O-acetylesterase; K05970 sialate O-acetylesterase [EC:3.1.1.53]
Sialate O-acetylesterase id=3602171 bin=GWF2_Lentisphaerae_49_21 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Tax=GWF2_Lentisphaerae_49_21_curated
SCNpilot_cont_1000_p_scaffold_1866_curated_6
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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comp(8977..12642)
DNA (3666bp) protein (1222aa)
Uncharacterized protein id=3602166 bin=GWF2_Lentisphaerae_49_21 species=Chryseobacterium sp. CF314 genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Tax=GWF2_Lentisphaerae_49_21_curated
SCNpilot_cont_1000_p_scaffold_1866_curated_7
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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comp(12650..13210)
DNA (561bp) protein (187aa)
Cellulase (Glycosyl hydrolase family 5) id=4196376 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Tax=GWF2_Lentisphaerae_49_21_curated
SCNpilot_cont_1000_p_scaffold_1866_curated_8
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

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comp(13273..14679)
DNA (1407bp) protein (469aa)
dehydrogenase n=1 Tax=Paenibacillus sp. A9 RepID=UPI00037F57E1
oxidoreductase domain-containing protein
Tax=RBG_13_Spirochaetes_68_11_curated
SCNpilot_cont_1000_p_scaffold_1866_curated_9
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

14774..15673
DNA (900bp) protein (300aa)
Transcriptional regulator, AraC family n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1ITD5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHF94244.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1866_curated_10
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15705..17363)
DNA (1659bp) protein (553aa)
FGGY-family pentulose kinase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1INC5_9BACT
Ribulokinase {ECO:0000313|EMBL:KJR61831.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
araB; ribulo-/ribitol kinase
SCNpilot_cont_1000_p_scaffold_1866_curated_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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17377..18027
DNA (651bp) protein (217aa)
Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A1D2_9PLAN
Xylose operon regulatory protein {ECO:0000313|EMBL:AIE86784.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
AraC family transcriptional regulator; K02529 LacI family transcriptional regulator
Displaying 11 items

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