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SCNpilot_cont_1000_p_scaffold_1509_curated

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1509_curated_1
unknown

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comp(3..557)
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1509_curated_2
unknown

Not on your lists

comp(554..1561)
DNA (1008bp) protein (336aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1509_curated_3
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(1624..2859)
DNA (1236bp) protein (412aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B1S3_9BACT
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EIQ01215.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1509_curated_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(2877..4772)
DNA (1896bp) protein (632aa)
beta-galactosidase (EC:3.2.1.23)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00035F9AAC
Glycoside hydrolase family 2 sugar binding {ECO:0000313|EMBL:EFH82124.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
SCNpilot_cont_1000_p_scaffold_1509_curated_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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4819..5667
DNA (849bp) protein (283aa)
Transcriptional regulator, AraC family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZY5_9CHLR
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFH82125.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1509_curated_6
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5733..6746
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Coriobacteriaceae bacterium GD5 RepID=UPI000348EB0F
Uncharacterized protein {ECO:0000313|EMBL:EDP14983.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
SCNpilot_cont_1000_p_scaffold_1509_curated_7
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

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6769..8145
DNA (1377bp) protein (459aa)
Major facilitator superfamily MFS_1 id=4200868 bin=GWC2_Planctomycetes_45_44 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
hypothetical protein
Tax=GWC2_Planctomycetes_45_44_curated
SCNpilot_cont_1000_p_scaffold_1509_curated_8
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

8164..9156
DNA (993bp) protein (331aa)
Phosphoglycerate dehydrogenase-like oxidoreductase n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B114_9BACT
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EIQ00956.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
SCNpilot_cont_1000_p_scaffold_1509_curated_9
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

9305..10297
DNA (993bp) protein (331aa)
Signal transduction histidine kinase, LytS n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNG7_OPITP
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ACB74401.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_1509_curated_10
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

10294..11025
DNA (732bp) protein (244aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNG8_OPITP
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACB74402.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_1509_curated_11
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

11128..11418
DNA (291bp) protein (97aa)
Putative transcriptional regulator n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AVT9_9BACT
Putative transcriptional regulator {ECO:0000313|EMBL:EIP99130.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
XRE family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1509_curated_12
unknown

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comp(11415..11693)
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1509_curated_13
unknown

Not on your lists

comp(11720..12040)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1509_curated_14
unknown

Not on your lists

comp(12037..12390)
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1509_curated_15
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(12397..15216)
DNA (2820bp) protein (940aa)
Conjugative relaxase domain protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZY28_OPITP
conjugative relaxase domain-containing protein
Conjugative relaxase domain protein {ECO:0000313|EMBL:ACB75227.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_1509_curated_16
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

15967..16698
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IMC1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHF92556.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
SCNpilot_cont_1000_p_scaffold_1509_curated_17
unknown

Not on your lists

16695..17327
DNA (633bp) protein (211aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1509_curated_18
unknown

Not on your lists

17546..18016
DNA (471bp) protein (157aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1509_curated_19
unknown

Not on your lists

18515..19075
DNA (561bp) protein (187aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1509_curated_20
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(19090..19944)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0G009_9BURK
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
SCNpilot_cont_1000_p_scaffold_1509_curated_21
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(19941..21035)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P578_AROAE
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
SCNpilot_cont_1000_p_scaffold_1509_curated_22
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(21135..21707)
DNA (573bp) protein (191aa)
Integrase domain protein SAM domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9X9W3_9BACT
Integrase domain protein SAM domain protein {ECO:0000313|EMBL:EEF63304.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Displaying 22 items

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