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SCNpilot_cont_1000_p_scaffold_1398_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1398_curated_1
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..3194)
DNA (3192bp) protein (1064aa)
Polysaccharide deacetylase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RBJ1_DESPD
polysaccharide deacetylase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
SCNpilot_cont_1000_p_scaffold_1398_curated_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3291..4406)
DNA (1116bp) protein (372aa)
dihydrolipoamide succinyltransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745E3B
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase {ECO:0000313|EMBL:EDY20049.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
SCNpilot_cont_1000_p_scaffold_1398_curated_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4425..7175)
DNA (2751bp) protein (917aa)
2-oxoglutarate dehydrogenase, E1 subunit (EC:1.2.4.2); K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D136_9BACT
2-oxoglutarate dehydrogenase, E1 subunit {ECO:0000313|EMBL:EDY20048.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1398_curated_4
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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7435..8367
DNA (933bp) protein (311aa)
ABC transporter related-protein id=4134273 bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein
Tax=GWF2_Lentisphaerae_57_35_curated
SCNpilot_cont_1000_p_scaffold_1398_curated_5
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

8369..9124
DNA (756bp) protein (252aa)
ABC-2 type transporter id=4134269 bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
nosY; ABC transporter permease; K01992 ABC-2 type transport system permease protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_1398_curated_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9121..10605
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D060_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20374.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
gldG; ABC transporter
SCNpilot_cont_1000_p_scaffold_1398_curated_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

10866..11984
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D059_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20373.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1398_curated_8
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12193..14157
DNA (1965bp) protein (655aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SJS7_GALCS
multi-sensor hybrid histidine kinase
Tax=GWA2_Gallionellales_54_124_curated
SCNpilot_cont_1000_p_scaffold_1398_curated_9
unknown

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comp(14190..14696)
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1398_curated_10
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


14740..17646
DNA (2907bp) protein (969aa)
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI00037A681C
Tax=GWF2_Verrucomicrobia_62_7_curated
SCNpilot_cont_1000_p_scaffold_1398_curated_11
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17651..18481)
DNA (831bp) protein (277aa)
ADA regulatory protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UIE6_MYXSD
ADA regulatory protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCNpilot_cont_1000_p_scaffold_1398_curated_12
unknown

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18588..19091
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1398_curated_13
unknown

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comp(19165..19683)
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1398_curated_14
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(19830..21974)
DNA (2145bp) protein (715aa)
Elongation factor G n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUX1_9BACT
translation elongation factor G; K02355 elongation factor G
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_1398_curated_15
unknown

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22138..22293
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1398_curated_16
unknown

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comp(22239..22952)
DNA (714bp) protein (238aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1398_curated_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

23046..23237
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVV5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21547.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Displaying 17 items

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